The 2.0 version of rSNPBase

Variant report

Variant rs61811199
Chromosome Location chr1:180763032-180763033
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180713000-180814200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr1:180740800-180775600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:180741600-180784000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr1:180751400-180774600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr1:180754600-180763400 Weak transcription NHLF lung
6 chr1:180754800-180763800 Weak transcription A549 lung
7 chr1:180754800-180781600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr1:180755000-180783800 Weak transcription Fetal Intestine Large intestine
9 chr1:180755400-180775800 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:180755400-180803800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr1:180755400-180820400 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr1:180755600-180774200 Weak transcription Dnd41 blood
13 chr1:180755600-180775200 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr1:180755800-180764600 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr1:180755800-180766400 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:180755800-180777800 Weak transcription Fetal Brain Female brain
17 chr1:180756000-180774600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr1:180756000-180781400 Weak transcription Liver Liver
19 chr1:180756800-180778800 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr1:180756800-180810200 Weak transcription Fetal Brain Male brain
21 chr1:180757400-180779400 Weak transcription Left Ventricle heart
22 chr1:180758000-180804000 Weak transcription Duodenum Mucosa Duodenum
23 chr1:180758600-180774400 Weak transcription K562 blood
24 chr1:180758600-180781200 Weak transcription Adipose Nuclei Adipose
25 chr1:180758800-180772600 Weak transcription Primary T cells fromperipheralblood blood
26 chr1:180759000-180775400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:180759000-180776800 Weak transcription Primary T cells from cord blood blood
28 chr1:180759000-180794800 Weak transcription Fetal Intestine Small intestine
29 chr1:180759200-180772600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:180759200-180774600 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr1:180759200-180774600 Weak transcription Primary B cells from cord blood blood
32 chr1:180759400-180775200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:180759600-180775600 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr1:180760800-180763800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:180761000-180763200 Enhancers Muscle Satellite Cultured Cells --
36 chr1:180761200-180763200 Enhancers Monocytes-CD14+_RO01746 blood
37 chr1:180761200-180772000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:180761200-180789200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:180761400-180763400 Weak transcription Psoas Muscle Psoas
40 chr1:180761400-180772600 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr1:180761400-180784400 Weak transcription NHEK skin
42 chr1:180761400-180794000 Weak transcription Primary B cells from peripheral blood blood
43 chr1:180761400-180796400 Weak transcription HMEC breast
44 chr1:180761400-180804600 Weak transcription Aorta Aorta
45 chr1:180762000-180764000 Enhancers Pancreatic Islets Pancreatic Islet
46 chr1:180762000-180780600 Weak transcription Osteobl bone
47 chr1:180762000-180785200 Weak transcription Primary hematopoietic stem cells blood
48 chr1:180762600-180775600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:180762800-180775400 Weak transcription Primary monocytes fromperipheralblood blood
50 chr1:180763000-180763200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015