Variant report

Variant	rs17486670
Chromosome Location	chr6:11950292-11950293
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:11940312..11942234-chr6:11949542..11951160,2	K562	blood:
2	chr6:11947667..11952733-chr6:12010159..12014739,6	K562	blood:
3	chr6:11943808..11945567-chr6:11950046..11952634,2	K562	blood:
4	chr6:11947667..11952221-chr6:12010159..12014739,5	K562	blood:

Variant related genes	Relation type
ENSG00000095951	Chromatin interaction

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs16872057	0.94[AMR][1000 genomes]
rs17486782	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17676319	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17676414	0.88[EUR][1000 genomes]
rs2024579	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs55718735	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs55839618	1.00[AFR][1000 genomes]
rs55875423	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs55911725	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs55964029	0.84[AFR][1000 genomes]
rs56087670	0.91[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs56115353	1.00[AFR][1000 genomes]
rs56138551	1.00[AFR][1000 genomes]
rs56204496	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs56209525	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs56412238	0.82[EUR][1000 genomes]
rs57774273	0.91[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs58026118	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs58086722	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs58221347	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs59206097	0.86[EUR][1000 genomes]
rs59592071	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs60200272	0.91[AFR][1000 genomes]
rs62395405	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs66614912	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs66708680	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs66720565	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs66964129	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs68009879	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs68019130	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72826011	1.00[AFR][1000 genomes]
rs72826027	0.91[AFR][1000 genomes]
rs742750	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11949800-11951600	Enhancers	K562	blood

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