The 2.0 version of rSNPBase

Variant report

Variant rs17501775
Chromosome Location chr1:225726582-225726583
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225701400-225727200 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:225701400-225744400 Weak transcription HUVEC blood vessel
3 chr1:225701400-225747000 Weak transcription Hela-S3 cervix
4 chr1:225705600-225747400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:225705800-225726600 Weak transcription NHEK skin
6 chr1:225707200-225726600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:225707200-225755000 Weak transcription Gastric stomach
8 chr1:225707400-225726600 Weak transcription Brain Angular Gyrus brain
9 chr1:225711400-225726600 Weak transcription Fetal Brain Female brain
10 chr1:225712400-225729600 Weak transcription Right Ventricle heart
11 chr1:225714800-225729600 Weak transcription Ovary ovary
12 chr1:225717600-225726600 Weak transcription NHDF-Ad bronchial
13 chr1:225717600-225732000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:225717600-225744400 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr1:225717800-225729600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:225717800-225744400 Weak transcription Fetal Muscle Trunk muscle
17 chr1:225717800-225745000 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr1:225717800-225747400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:225717800-225747400 Weak transcription Fetal Stomach stomach
20 chr1:225717800-225758200 Weak transcription HepG2 liver
21 chr1:225718200-225727000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:225718400-225726800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:225718400-225732600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:225718400-225756400 Weak transcription NHLF lung
25 chr1:225718800-225726600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:225719000-225728000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:225719800-225727000 Enhancers HUES48 Cell Line embryonic stem cell
28 chr1:225719800-225730400 Enhancers HUES64 Cell Line embryonic stem cell
29 chr1:225720000-225726600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:225721000-225728600 Weak transcription Fetal Brain Male brain
31 chr1:225721400-225726600 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr1:225721400-225726600 Weak transcription HSMMtube muscle
33 chr1:225721600-225735200 Weak transcription HSMM muscle
34 chr1:225721800-225726600 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:225722000-225726600 Weak transcription Fetal Heart heart
36 chr1:225722000-225727200 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr1:225722000-225729800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:225722800-225726600 Weak transcription Rectal Smooth Muscle rectum
39 chr1:225722800-225726600 Weak transcription A549 lung
40 chr1:225722800-225728000 Weak transcription Stomach Smooth Muscle stomach
41 chr1:225722800-225747600 Weak transcription Fetal Intestine Small intestine
42 chr1:225723000-225728200 Weak transcription Colon Smooth Muscle Colon
43 chr1:225723200-225739600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr1:225723400-225735200 Weak transcription NH-A brain
45 chr1:225723600-225726600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr1:225723600-225726600 Weak transcription Osteobl bone
47 chr1:225724600-225728800 Enhancers iPS-18 Cell Line embryonic stem cell
48 chr1:225724800-225726800 Enhancers Cortex derived primary cultured neurospheres brain
49 chr1:225724800-225728400 Enhancers iPS-15b Cell Line embryonic stem cell
50 chr1:225725000-225727400 Enhancers ES-WA7 Cell Line embryonic stem cell

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Last update: Aug 31, 2015