The 2.0 version of rSNPBase

Variant report

Variant rs17568665
Chromosome Location chr1:225810823-225810824
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225760000-225820600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:225780800-225815400 Weak transcription H9 Cell Line embryonic stem cell
3 chr1:225781000-225825400 Weak transcription Fetal Stomach stomach
4 chr1:225793600-225813200 Weak transcription Left Ventricle heart
5 chr1:225793600-225813800 Weak transcription NH-A brain
6 chr1:225794600-225813200 Weak transcription Lung lung
7 chr1:225795600-225813200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:225795600-225813200 Weak transcription Psoas Muscle Psoas
9 chr1:225795600-225813800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:225796400-225812600 Weak transcription Right Atrium heart
11 chr1:225796600-225812200 Weak transcription Fetal Muscle Trunk muscle
12 chr1:225797200-225815200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr1:225797400-225812600 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr1:225797400-225814000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr1:225800200-225812600 Weak transcription Gastric stomach
16 chr1:225801600-225813600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr1:225802600-225813400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:225802600-225813800 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr1:225802800-225811600 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr1:225805800-225814800 Weak transcription Duodenum Mucosa Duodenum
21 chr1:225806000-225812400 Weak transcription Stomach Smooth Muscle stomach
22 chr1:225806000-225813400 Weak transcription Aorta Aorta
23 chr1:225806000-225813800 Weak transcription Fetal Intestine Small intestine
24 chr1:225806200-225812400 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:225806200-225817600 Weak transcription Fetal Brain Female brain
26 chr1:225806400-225813400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:225806400-225813800 Weak transcription Fetal Muscle Leg muscle
28 chr1:225806400-225814200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:225806400-225814200 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr1:225806400-225814400 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr1:225806400-225815200 Weak transcription Adipose Nuclei Adipose
32 chr1:225806600-225812400 Weak transcription Fetal Lung lung
33 chr1:225806600-225812600 Weak transcription Fetal Heart heart
34 chr1:225806800-225812600 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr1:225806800-225813200 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr1:225806800-225813200 Weak transcription Rectal Smooth Muscle rectum
37 chr1:225806800-225813600 Weak transcription Muscle Satellite Cultured Cells --
38 chr1:225806800-225813800 Weak transcription Right Ventricle heart
39 chr1:225806800-225814000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:225806800-225814000 Weak transcription NHDF-Ad bronchial
41 chr1:225806800-225814600 Weak transcription A549 lung
42 chr1:225807000-225812600 Weak transcription Colon Smooth Muscle Colon
43 chr1:225807000-225814000 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr1:225807200-225813200 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr1:225807200-225820400 Weak transcription H1 Cell Line embryonic stem cell
46 chr1:225808000-225812400 Weak transcription Ovary ovary
47 chr1:225808200-225818400 Weak transcription Fetal Brain Male brain
48 chr1:225809400-225811200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr1:225809600-225813000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:225809600-225813600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015