Variant report

Variant rs1537877
Chromosome Location chr1:225697295-225697296
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225677200-225703600 Weak transcription Fetal Brain Female brain
2 chr1:225681800-225699800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:225686800-225699800 Weak transcription Adipose Nuclei Adipose
4 chr1:225687000-225705000 Weak transcription Spleen Spleen
5 chr1:225687400-225704400 Weak transcription Fetal Stomach stomach
6 chr1:225688600-225704600 Weak transcription Placenta Placenta
7 chr1:225688800-225711400 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:225689200-225721000 Weak transcription Duodenum Mucosa Duodenum
9 chr1:225691000-225706200 Weak transcription Primary B cells from cord blood blood
10 chr1:225691200-225705000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:225692600-225704800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:225693200-225702800 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr1:225694800-225698000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:225695000-225699200 Weak transcription Liver Liver
15 chr1:225695200-225697800 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr1:225695400-225697800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr1:225695400-225704800 Weak transcription Fetal Brain Male brain
18 chr1:225695600-225721200 Weak transcription Fetal Kidney kidney
19 chr1:225695800-225697800 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:225695800-225697800 Genic enhancers HSMM muscle
21 chr1:225695800-225697800 Enhancers NHDF-Ad bronchial
22 chr1:225695800-225697800 Enhancers NHLF lung
23 chr1:225695800-225697800 Genic enhancers Osteobl bone
24 chr1:225695800-225698000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:225695800-225698200 Enhancers HUVEC blood vessel
26 chr1:225696000-225697400 Enhancers Rectal Smooth Muscle rectum
27 chr1:225696000-225697800 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
28 chr1:225696000-225697800 Genic enhancers iPS-18 Cell Line embryonic stem cell
29 chr1:225696000-225698000 Enhancers Hela-S3 cervix
30 chr1:225696000-225698200 Enhancers HMEC breast
31 chr1:225696000-225698400 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr1:225696200-225697600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:225696200-225697800 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr1:225696200-225697800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:225696200-225698000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:225696400-225697400 Genic enhancers Cortex derived primary cultured neurospheres brain
37 chr1:225696400-225697400 Enhancers Colon Smooth Muscle Colon
38 chr1:225696400-225697400 Enhancers Duodenum Smooth Muscle Duodenum
39 chr1:225696400-225697600 Enhancers Brain Angular Gyrus brain
40 chr1:225696400-225697800 Genic enhancers H1 Cell Line embryonic stem cell
41 chr1:225696400-225697800 Enhancers H9 Cell Line embryonic stem cell
42 chr1:225696400-225697800 Genic enhancers Muscle Satellite Cultured Cells --
43 chr1:225696400-225697800 Enhancers Brain Hippocampus Middle brain
44 chr1:225696400-225697800 Enhancers Brain Inferior Temporal Lobe brain
45 chr1:225696400-225697800 Enhancers Small Intestine intestine
46 chr1:225696400-225698200 Enhancers Brain Anterior Caudate brain
47 chr1:225696400-225698200 Enhancers Brain Substantia Nigra brain
48 chr1:225696400-225698400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr1:225696400-225698600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr1:225696600-225697400 Enhancers Skeletal Muscle Female skeletal muscle

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