Variant report

Variant rs181936280
Chromosome Location chr19:53324189-53324190
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53313600-53324200 Weak transcription Brain Substantia Nigra brain
2 chr19:53313800-53324200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr19:53314000-53324200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:53314000-53324200 Weak transcription Aorta Aorta
5 chr19:53319600-53324200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:53321200-53324200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr19:53321200-53324200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr19:53321200-53324200 Weak transcription Left Ventricle heart
9 chr19:53321200-53324200 Weak transcription Placenta Amnion Placenta Amnion
10 chr19:53321600-53324200 Weak transcription Brain Inferior Temporal Lobe brain
11 chr19:53323600-53324200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr19:53323600-53324200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
13 chr19:53323600-53324200 Enhancers Primary T killer naive cells fromperipheralblood blood
14 chr19:53323600-53324200 Enhancers Placenta Placenta
15 chr19:53323600-53324200 Enhancers Gastric stomach
16 chr19:53323600-53324400 Flanking Active TSS Dnd41 blood
17 chr19:53323600-53324600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr19:53323600-53325000 Active TSS ES-I3 Cell Line embryonic stem cell
19 chr19:53323600-53325000 Active TSS HUES6 Cell Line embryonic stem cell
20 chr19:53323600-53325000 Active TSS iPS-15b Cell Line embryonic stem cell
21 chr19:53323600-53325000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
22 chr19:53323600-53325200 Active TSS Primary hematopoietic stem cells short term culture blood
23 chr19:53323600-53325200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
24 chr19:53323600-53325400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr19:53323600-53325400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr19:53323800-53324200 Enhancers Primary monocytes fromperipheralblood blood
27 chr19:53323800-53324200 Enhancers Primary neutrophils fromperipheralblood blood
28 chr19:53323800-53324200 Enhancers Primary T helper naive cells from peripheral blood blood
29 chr19:53323800-53324200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
30 chr19:53323800-53324200 Flanking Active TSS Duodenum Smooth Muscle Duodenum
31 chr19:53323800-53324200 Enhancers Skeletal Muscle Female skeletal muscle
32 chr19:53323800-53324600 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
33 chr19:53323800-53324600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr19:53323800-53324600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
35 chr19:53323800-53325000 Active TSS H9 Cell Line embryonic stem cell
36 chr19:53323800-53325000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
37 chr19:53323800-53325000 Active TSS HepG2 liver
38 chr19:53323800-53325000 Active TSS K562 blood
39 chr19:53323800-53325200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr19:53323800-53325200 Active TSS Cortex derived primary cultured neurospheres brain
41 chr19:53323800-53325200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr19:53323800-53325200 Active TSS Hela-S3 cervix
43 chr19:53323800-53325200 Active TSS NHEK skin
44 chr19:53323800-53325400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr19:53323800-53325400 Active TSS Fetal Intestine Large intestine
46 chr19:53323800-53325400 Active TSS GM12878-XiMat blood
47 chr19:53323800-53325600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr19:53323800-53325600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr19:53323800-53325600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
50 chr19:53324000-53324200 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell

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