Variant report

Variant	rs182764
Chromosome Location	chr9:102028847-102028848
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:102028675..102029475-chr9:102773101..102774005,3	K562	blood:
2	chr9:102028703..102029364-chr9:102104406..102105197,3	MCF-7	breast:
3	chr1:179141663..179142163-chr9:102028566..102029118,2	MCF-7	breast:
4	chr9:102028630..102029376-chr9:102104555..102105135,2	MCF-7	breast:
5	chr9:102028238..102029483-chr9:102273689..102274712,3	K562	blood:
6	chr9:102028581..102029362-chr9:102113600..102114277,2	MCF-7	breast:

rs_ID	r²[population]
rs162614	0.82[AMR][1000 genomes]
rs162615	0.87[AMR][1000 genomes]
rs162627	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs162631	0.81[AMR][1000 genomes]
rs1699412	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1699422	0.86[AMR][1000 genomes]
rs1746147	0.84[AMR][1000 genomes]
rs179238	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs186631	0.81[AMR][1000 genomes]
rs400935	0.81[AMR][1000 genomes]
rs450698	0.82[AMR][1000 genomes]
rs701370	0.82[AMR][1000 genomes]
rs790190	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]

Chromatin state (count:84 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:102022200-102034800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr9:102022200-102038000	Weak transcription	Aorta	Aorta
3	chr9:102027600-102029400	Enhancers	Fetal Heart	heart
4	chr9:102027800-102029400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr9:102028200-102029000	Enhancers	Gastric	stomach
6	chr9:102028200-102029000	Enhancers	Ovary	ovary
7	chr9:102028200-102029000	Enhancers	Spleen	Spleen
8	chr9:102028200-102029400	Enhancers	HepG2	liver
9	chr9:102028200-102029600	Enhancers	Fetal Thymus	thymus
10	chr9:102028400-102029000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr9:102028400-102029000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr9:102028400-102029000	Enhancers	Right Ventricle	heart
13	chr9:102028400-102029200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr9:102028400-102029200	Enhancers	Left Ventricle	heart
15	chr9:102028400-102029600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr9:102028600-102029000	Enhancers	HUES6 Cell Line	embryonic stem cell
17	chr9:102028600-102029000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr9:102028600-102029000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr9:102028600-102029000	Enhancers	Brain Angular Gyrus	brain
20	chr9:102028600-102029000	Enhancers	Brain Substantia Nigra	brain
21	chr9:102028600-102029000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
22	chr9:102028600-102029200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
23	chr9:102028600-102029200	Enhancers	Liver	Liver
24	chr9:102028600-102029200	Flanking Active TSS	Brain Cingulate Gyrus	brain
25	chr9:102028600-102029200	Enhancers	Colon Smooth Muscle	Colon
26	chr9:102028600-102029200	Bivalent Enhancer	Fetal Lung	lung
27	chr9:102028600-102029200	Enhancers	Fetal Stomach	stomach
28	chr9:102028600-102029200	Enhancers	HMEC	breast
29	chr9:102028600-102029400	Enhancers	Primary monocytes fromperipheralblood	blood
30	chr9:102028600-102029400	Enhancers	Primary B cells from peripheral blood	blood
31	chr9:102028600-102029400	Enhancers	Primary hematopoietic stem cells short term culture	blood
32	chr9:102028600-102029400	Enhancers	HUVEC	blood vessel
33	chr9:102028600-102029600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr9:102028600-102029600	Flanking Active TSS	GM12878-XiMat	blood
35	chr9:102028600-102029600	Enhancers	NHDF-Ad	bronchial
36	chr9:102028800-102029000	Flanking Active TSS	Primary T cells from cord blood	blood
37	chr9:102028800-102029000	Enhancers	Muscle Satellite Cultured Cells	--
38	chr9:102028800-102029000	Flanking Active TSS	Brain Anterior Caudate	brain
39	chr9:102028800-102029000	Flanking Active TSS	Brain Hippocampus Middle	brain
40	chr9:102028800-102029000	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
41	chr9:102028800-102029000	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
42	chr9:102028800-102029000	Enhancers	Fetal Intestine Large	intestine
43	chr9:102028800-102029000	Enhancers	Rectal Smooth Muscle	rectum
44	chr9:102028800-102029000	Enhancers	A549	lung
45	chr9:102028800-102029000	Enhancers	Dnd41	blood
46	chr9:102028800-102029000	Flanking Active TSS	Hela-S3	cervix
47	chr9:102028800-102029000	Flanking Active TSS	Osteobl	bone
48	chr9:102028800-102029200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
49	chr9:102028800-102029200	Enhancers	Breast Myoepithelial Primary Cells	Breast
50	chr9:102028800-102029200	Enhancers	Primary T cells fromperipheralblood	blood

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