Variant report

Variant	rs1856357
Chromosome Location	chr10:117074263-117074264
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10749173	1.00[CEU][hapmap];0.87[YRI][hapmap];0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10787565	1.00[CEU][hapmap];0.85[YRI][hapmap]
rs10885679	1.00[CEU][hapmap];0.85[YRI][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11197158	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1264747	1.00[CEU][hapmap];0.87[YRI][hapmap]
rs1268915	1.00[CEU][hapmap]
rs1953758	1.00[CEU][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2201364	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2253505	0.85[YRI][hapmap]
rs2255916	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2264063	1.00[CEU][hapmap];0.87[YRI][hapmap];0.87[AMR][1000 genomes]
rs2265929	1.00[CEU][hapmap]
rs2492983	0.84[EUR][1000 genomes]
rs41314493	0.84[EUR][1000 genomes]
rs4409743	1.00[CEU][hapmap];0.85[YRI][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4752730	1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6585323	1.00[CEU][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7074552	1.00[CEU][hapmap]
rs7915481	1.00[CEU][hapmap];0.84[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117050600-117079200	Weak transcription	Ovary	ovary
2	chr10:117055200-117075800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr10:117064400-117080600	Weak transcription	Aorta	Aorta

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links