Variant report

Variant	rs1953758
Chromosome Location	chr10:117075175-117075176
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10749173	1.00[CEU][hapmap];0.85[YRI][hapmap];0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10787565	1.00[CEU][hapmap];1.00[GIH][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap]
rs10885679	1.00[CEU][hapmap];0.82[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11197158	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1264747	1.00[CEU][hapmap];0.85[YRI][hapmap]
rs1264753	0.82[YRI][hapmap]
rs1264754	0.82[YRI][hapmap]
rs1264759	0.82[YRI][hapmap]
rs1264780	0.82[YRI][hapmap]
rs1264784	0.82[YRI][hapmap]
rs1264791	0.82[YRI][hapmap]
rs1268915	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[YRI][hapmap]
rs1856357	1.00[CEU][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1999909	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs2201364	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2252475	1.00[YRI][hapmap]
rs2253505	0.82[YRI][hapmap]
rs2255916	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2264063	1.00[CEU][hapmap];0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs2265929	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs2420076	1.00[YRI][hapmap]
rs2440314	1.00[YRI][hapmap]
rs2492983	0.84[EUR][1000 genomes]
rs41314493	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4409743	1.00[CEU][hapmap];0.82[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4752730	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs621291	1.00[YRI][hapmap]
rs6585323	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs677604	1.00[YRI][hapmap]
rs7074552	1.00[CEU][hapmap]
rs7081522	1.00[YRI][hapmap]
rs7099807	0.87[AMR][1000 genomes]
rs7915481	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs9651421	1.00[YRI][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117050600-117079200	Weak transcription	Ovary	ovary
2	chr10:117055200-117075800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr10:117064400-117080600	Weak transcription	Aorta	Aorta

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