Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10749173	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs10787565	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs10885679	1.00[CEU][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11197158	1.00[AMR][1000 genomes]
rs1264747	1.00[CEU][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs1268915	1.00[CEU][hapmap];0.85[YRI][hapmap]
rs1856357	1.00[CEU][hapmap];0.87[YRI][hapmap];0.87[AMR][1000 genomes]
rs1953758	1.00[CEU][hapmap];0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs2201364	1.00[AMR][1000 genomes]
rs2252475	0.85[YRI][hapmap]
rs2255916	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2265929	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs2420076	0.85[YRI][hapmap]
rs2440314	0.85[YRI][hapmap]
rs2492983	0.85[EUR][1000 genomes]
rs41314493	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4409743	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs4752730	0.87[YRI][hapmap];1.00[AMR][1000 genomes]
rs6585323	1.00[CEU][hapmap];0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs677604	0.87[YRI][hapmap]
rs7074552	1.00[CEU][hapmap]
rs7081522	0.85[YRI][hapmap]
rs7099807	0.87[AMR][1000 genomes]
rs7915481	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs9651421	0.87[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869279	chr10:116884639-117032437	Enhancers ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv868940	chr10:116933802-117032437	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:116981000-117010800	Weak transcription	Aorta	Aorta
2	chr10:116997200-117049800	Weak transcription	Ovary	ovary
3	chr10:117003200-117012200	Weak transcription	Pancreatic Islets	Pancreatic Islet

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