Variant report

No.	Distal block	Cell Line	Cell type
1	chr2:40001641..40002163-chr3:101263430..101263949,2	MCF-7	breast:
2	chr3:101262295..101266034-chr3:101290891..101293840,3	MCF-7	breast:
3	chr3:101261380..101263536-chr3:101266715..101268479,2	K562	blood:
4	chr3:101214465..101215044-chr3:101263439..101263951,2	MCF-7	breast:
5	chr3:101231701..101233998-chr3:101261738..101264309,2	MCF-7	breast:
6	chr2:40000146..40001663-chr3:101262826..101264500,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000081154	Chromatin interaction
ENSG00000138468	Chromatin interaction

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11918335	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11919906	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12636505	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13347262	1.00[CEU][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1405781	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1976944	0.87[CEU][hapmap]
rs1986294	0.82[EUR][1000 genomes]
rs34774691	0.88[ASN][1000 genomes]
rs4260407	0.81[ASN][1000 genomes]
rs482055	0.82[EUR][1000 genomes]
rs489455	0.82[EUR][1000 genomes]
rs501702	0.82[EUR][1000 genomes]
rs505037	0.82[EUR][1000 genomes]
rs513188	0.82[EUR][1000 genomes]
rs517698	0.82[EUR][1000 genomes]
rs545322	0.82[EUR][1000 genomes]
rs546090	0.82[EUR][1000 genomes]
rs554215	0.82[EUR][1000 genomes]
rs55633838	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs563909	0.82[EUR][1000 genomes]
rs569339	0.82[EUR][1000 genomes]
rs570318	0.82[EUR][1000 genomes]
rs573908	0.82[EUR][1000 genomes]
rs575317	0.82[EUR][1000 genomes]
rs62280737	0.81[ASN][1000 genomes]
rs62280745	0.81[ASN][1000 genomes]
rs62280746	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62280747	0.81[ASN][1000 genomes]
rs6777720	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9790303	0.84[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:101260600-101263600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
2	chr3:101260600-101263600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
3	chr3:101260600-101263800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
4	chr3:101260600-101263800	Enhancers	Primary T helper naive cells from peripheral blood	blood
5	chr3:101260600-101263800	Enhancers	Primary T helper cells PMA-I stimulated	--
6	chr3:101260800-101263600	Enhancers	Primary T cells from cord blood	blood
7	chr3:101260800-101263600	Enhancers	Primary T helper cells fromperipheralblood	blood
8	chr3:101260800-101263800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
9	chr3:101260800-101263800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
10	chr3:101261000-101266600	Weak transcription	HepG2	liver
11	chr3:101261200-101263600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
12	chr3:101261600-101267400	Weak transcription	K562	blood
13	chr3:101262000-101263800	Enhancers	iPS-15b Cell Line	embryonic stem cell

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