Variant report

Variant	rs34774691
Chromosome Location	chr3:101273551-101273552
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:101251480..101254099-chr3:101272638..101274456,2	K562	blood:
2	chr3:101273531..101276601-chr3:101279103..101282496,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000174173	Chromatin interaction

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs1078154	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11918335	0.88[ASN][1000 genomes]
rs12629395	0.87[EUR][1000 genomes]
rs12631729	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12636505	0.91[ASN][1000 genomes]
rs13062695	0.92[EUR][1000 genomes]
rs13063994	0.93[EUR][1000 genomes]
rs13065665	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13070567	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13078121	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13097625	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13097712	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13347262	0.88[ASN][1000 genomes]
rs1405781	0.88[ASN][1000 genomes]
rs16844078	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1880982	0.88[ASN][1000 genomes]
rs1976944	0.86[ASN][1000 genomes]
rs34408425	0.84[AFR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34930373	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35917542	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3762735	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4260407	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs55633838	0.91[ASN][1000 genomes]
rs62280733	0.81[AMR][1000 genomes]
rs62280735	0.81[AMR][1000 genomes]
rs62280737	0.81[AMR][1000 genomes]
rs62280745	0.80[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs62280747	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6441619	0.88[EUR][1000 genomes]
rs6762367	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6777720	0.86[ASN][1000 genomes]
rs6792847	0.88[EUR][1000 genomes]
rs71315243	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71315244	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs71315245	0.87[EUR][1000 genomes]
rs71315246	0.88[EUR][1000 genomes]
rs72487765	0.83[AMR][1000 genomes]
rs7619122	0.84[AFR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7622461	0.81[AMR][1000 genomes]
rs7630598	0.88[EUR][1000 genomes]
rs7637805	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9790303	0.81[AMR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:101268400-101275400	Weak transcription	K562	blood
2	chr3:101273000-101273600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr3:101273000-101277600	Weak transcription	H1 Cell Line	embryonic stem cell

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