Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1078154	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12629395	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12631729	0.92[EUR][1000 genomes]
rs13063994	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13065665	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13070567	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs13078121	0.92[EUR][1000 genomes]
rs13097625	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs13097712	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16844078	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34408425	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34774691	0.92[EUR][1000 genomes]
rs34930373	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35917542	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3762735	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6441619	0.91[EUR][1000 genomes]
rs6762367	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6792847	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs71315243	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs71315244	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs71315245	0.89[EUR][1000 genomes]
rs71315246	0.91[EUR][1000 genomes]
rs7619122	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7630598	0.91[EUR][1000 genomes]
rs7637805	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv497784	chr3:101315009-102092989	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
2	nsv963347	chr3:101318121-101342898	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:101331400-101342600	Weak transcription	K562	blood
2	chr3:101331800-101341600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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