Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:64972864..64974430-chr14:65133703..65136620,2	MCF-7	breast:
2	chr14:65133710..65135609-chr14:65381546..65383750,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11158554	0.93[ASN][1000 genomes]
rs11158555	0.93[ASN][1000 genomes]
rs11848238	0.95[ASN][1000 genomes]
rs12431555	0.93[ASN][1000 genomes]
rs12432551	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12435904	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12436296	0.84[ASN][1000 genomes]
rs12893758	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17113846	0.82[ASN][1000 genomes]
rs1950302	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1956419	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2016351	0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs4899141	0.81[ASN][1000 genomes]
rs4902303	0.82[ASN][1000 genomes]
rs7142258	0.81[ASN][1000 genomes]
rs7143298	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7143397	0.81[ASN][1000 genomes]
rs733127	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8007886	0.80[ASN][1000 genomes]
rs910998	0.80[ASN][1000 genomes]
rs911000	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049097	chr14:65027753-65202018	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65127600-65139800	Weak transcription	Esophagus	oesophagus
2	chr14:65130200-65135800	Weak transcription	A549	lung
3	chr14:65130400-65138600	Weak transcription	HMEC	breast
4	chr14:65130400-65139800	Weak transcription	Fetal Muscle Leg	muscle
5	chr14:65130600-65139600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr14:65133400-65139800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr14:65134000-65138400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr14:65134000-65140200	Weak transcription	Duodenum Mucosa	Duodenum
9	chr14:65134400-65135000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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