Variant report

Variant rs2075566
Chromosome Location chr1:155224091-155224092
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155220600-155224600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:155220800-155224400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:155221000-155224200 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr1:155221000-155224200 Weak transcription Thymus Thymus
5 chr1:155221000-155224400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr1:155221200-155224200 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr1:155223000-155224800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
8 chr1:155223200-155224200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr1:155223200-155224200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr1:155223200-155224200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:155223200-155224400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:155223200-155224400 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:155223200-155224400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:155223200-155224400 Enhancers Placenta Amnion Placenta Amnion
15 chr1:155223200-155224600 Flanking Active TSS Muscle Satellite Cultured Cells --
16 chr1:155223200-155224600 Flanking Active TSS Hela-S3 cervix
17 chr1:155223200-155224600 Flanking Active TSS HepG2 liver
18 chr1:155223200-155224600 Flanking Active TSS NHLF lung
19 chr1:155223200-155224800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:155223200-155224800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
21 chr1:155223200-155224800 Flanking Active TSS Brain Inferior Temporal Lobe brain
22 chr1:155223200-155224800 Flanking Active TSS Dnd41 blood
23 chr1:155223200-155225000 Flanking Active TSS Stomach Smooth Muscle stomach
24 chr1:155223200-155226000 Active TSS iPS-18 Cell Line embryonic stem cell
25 chr1:155223200-155227600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:155223400-155224200 Enhancers Esophagus oesophagus
27 chr1:155223400-155224200 Enhancers Fetal Intestine Small intestine
28 chr1:155223400-155224200 Enhancers Gastric stomach
29 chr1:155223400-155224400 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr1:155223400-155224400 Enhancers Primary monocytes fromperipheralblood blood
31 chr1:155223400-155224400 Flanking Active TSS Brain Angular Gyrus brain
32 chr1:155223400-155224400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
33 chr1:155223400-155224400 Enhancers Fetal Heart heart
34 chr1:155223400-155224400 Enhancers Fetal Thymus thymus
35 chr1:155223400-155224400 Enhancers Spleen Spleen
36 chr1:155223400-155224400 Flanking Active TSS Osteobl bone
37 chr1:155223400-155224600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
38 chr1:155223400-155224600 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:155223400-155224600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:155223400-155224600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:155223400-155224600 Flanking Active TSS Brain Cingulate Gyrus brain
42 chr1:155223400-155224600 Flanking Active TSS Brain Germinal Matrix brain
43 chr1:155223400-155224600 Flanking Active TSS Brain Hippocampus Middle brain
44 chr1:155223400-155224600 Flanking Active TSS NH-A brain
45 chr1:155223400-155224800 Flanking Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:155223400-155224800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
47 chr1:155223400-155224800 Flanking Active TSS Duodenum Mucosa Duodenum
48 chr1:155223400-155224800 Flanking Active TSS Fetal Brain Female brain
49 chr1:155223400-155224800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
50 chr1:155223400-155224800 Flanking Active TSS K562 blood

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