Variant report

Variant rs2242577
Chromosome Location chr1:155224301-155224302
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155220600-155224600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:155220800-155224400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:155221000-155224400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr1:155223000-155224800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:155223200-155224400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:155223200-155224400 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr1:155223200-155224400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:155223200-155224400 Enhancers Placenta Amnion Placenta Amnion
9 chr1:155223200-155224600 Flanking Active TSS Muscle Satellite Cultured Cells --
10 chr1:155223200-155224600 Flanking Active TSS Hela-S3 cervix
11 chr1:155223200-155224600 Flanking Active TSS HepG2 liver
12 chr1:155223200-155224600 Flanking Active TSS NHLF lung
13 chr1:155223200-155224800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:155223200-155224800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:155223200-155224800 Flanking Active TSS Brain Inferior Temporal Lobe brain
16 chr1:155223200-155224800 Flanking Active TSS Dnd41 blood
17 chr1:155223200-155225000 Flanking Active TSS Stomach Smooth Muscle stomach
18 chr1:155223200-155226000 Active TSS iPS-18 Cell Line embryonic stem cell
19 chr1:155223200-155227600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:155223400-155224400 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:155223400-155224400 Enhancers Primary monocytes fromperipheralblood blood
22 chr1:155223400-155224400 Flanking Active TSS Brain Angular Gyrus brain
23 chr1:155223400-155224400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
24 chr1:155223400-155224400 Enhancers Fetal Heart heart
25 chr1:155223400-155224400 Enhancers Fetal Thymus thymus
26 chr1:155223400-155224400 Enhancers Spleen Spleen
27 chr1:155223400-155224400 Flanking Active TSS Osteobl bone
28 chr1:155223400-155224600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
29 chr1:155223400-155224600 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:155223400-155224600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr1:155223400-155224600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:155223400-155224600 Flanking Active TSS Brain Cingulate Gyrus brain
33 chr1:155223400-155224600 Flanking Active TSS Brain Germinal Matrix brain
34 chr1:155223400-155224600 Flanking Active TSS Brain Hippocampus Middle brain
35 chr1:155223400-155224600 Flanking Active TSS NH-A brain
36 chr1:155223400-155224800 Flanking Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr1:155223400-155224800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
38 chr1:155223400-155224800 Flanking Active TSS Duodenum Mucosa Duodenum
39 chr1:155223400-155224800 Flanking Active TSS Fetal Brain Female brain
40 chr1:155223400-155224800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
41 chr1:155223400-155224800 Flanking Active TSS K562 blood
42 chr1:155223400-155225000 Flanking Active TSS HUVEC blood vessel
43 chr1:155223400-155226000 Flanking Active TSS HMEC breast
44 chr1:155223600-155224400 Enhancers Primary T helper naive cells fromperipheralblood blood
45 chr1:155223600-155224400 Enhancers Liver Liver
46 chr1:155223600-155224400 Enhancers Lung lung
47 chr1:155223600-155224400 Enhancers Small Intestine intestine
48 chr1:155223600-155224600 Enhancers Primary B cells from peripheral blood blood
49 chr1:155223600-155224600 Enhancers Primary T cells fromperipheralblood blood
50 chr1:155223600-155224600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin

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