Variant report
Variant | rs4620533 |
---|---|
Chromosome Location | chr1:155262613-155262614 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:7)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:7 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:155261117..155264004-chr1:155277463..155281311,3 | MCF-7 | breast: | |
2 | chr1:155261455..155264148-chr1:155268677..155271659,2 | MCF-7 | breast: | |
3 | chr1:155256966..155259263-chr1:155261793..155263472,2 | MCF-7 | breast: | |
4 | chr1:155245531..155248491-chr1:155261533..155265348,4 | MCF-7 | breast: | |
5 | chr1:155220670..155222238-chr1:155260191..155263130,2 | MCF-7 | breast: | |
6 | chr1:155261026..155263305-chr1:155270752..155272531,2 | K562 | blood: | |
7 | chr1:155260049..155265292-chr1:155266559..155270522,5 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000176444 | Chromatin interaction |
ENSG00000160767 | Chromatin interaction |
ENSG00000143627 | Chromatin interaction |
ENSG00000160752 | Chromatin interaction |
ENSG00000143630 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs10128085 | 0.82[EUR][1000 genomes] |
rs1045253 | 0.81[ASN][1000 genomes] |
rs1046188 | 0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1052176 | 0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1052177 | 0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1076556 | 0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1078699 | 0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs10796940 | 0.81[ASN][1000 genomes] |
rs10796941 | 0.85[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs10796943 | 0.82[CHB][hapmap];0.90[TSI][hapmap] |
rs10796945 | 0.84[CHB][hapmap];0.85[TSI][hapmap] |
rs10908459 | 0.82[ASN][1000 genomes] |
rs10908461 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs10908462 | 0.88[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs10908463 | 0.96[CEU][hapmap];0.84[CHB][hapmap];0.86[MEX][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs10908465 | 0.84[CEU][hapmap];0.84[CHB][hapmap];0.85[TSI][hapmap] |
rs11264343 | 0.81[ASN][1000 genomes] |
rs11264345 | 0.82[ASN][1000 genomes] |
rs11264346 | 0.94[ASN][1000 genomes] |
rs11264347 | 0.83[EUR][1000 genomes] |
rs11264348 | 0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs11264349 | 0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs11264351 | 0.90[ASN][1000 genomes] |
rs11264352 | 0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs11264353 | 0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs11264354 | 0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs11264355 | 0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs11264357 | 0.92[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs11264358 | 0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs11264359 | 0.81[ASW][hapmap];0.92[CEU][hapmap];0.90[CHB][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs11264361 | 0.96[CEU][hapmap];0.84[CHB][hapmap];0.80[CHD][hapmap];0.86[MEX][hapmap];0.97[TSI][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs11264367 | 0.84[CEU][hapmap];0.84[CHB][hapmap] |
rs11264369 | 0.84[CHB][hapmap] |
rs11264371 | 0.84[CHB][hapmap] |
rs11264372 | 0.84[CHB][hapmap] |
rs11264375 | 0.84[CEU][hapmap];0.84[CHB][hapmap];0.82[MEX][hapmap];0.85[TSI][hapmap] |
rs1142287 | 0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs11577338 | 0.95[ASN][1000 genomes] |
rs12026638 | 0.89[CHB][hapmap];0.85[TSI][hapmap] |
rs12032720 | 0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12034326 | 0.83[ASN][1000 genomes] |
rs12041534 | 0.84[CEU][hapmap];0.84[CHB][hapmap];0.81[MEX][hapmap];0.85[TSI][hapmap] |
rs12042020 | 0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12044063 | 0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12049375 | 0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12067675 | 0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12239114 | 0.84[CEU][hapmap];0.84[CHB][hapmap];0.82[MEX][hapmap];0.91[TSI][hapmap] |
rs12407919 | 0.81[ASN][1000 genomes] |
rs12563994 | 0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs12723761 | 0.80[ASN][1000 genomes] |
rs12724079 | 0.84[CHB][hapmap] |
rs12724449 | 0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs12732972 | 0.82[ASN][1000 genomes] |
rs12748155 | 0.86[ASN][1000 genomes] |
rs12749306 | 0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1325908 | 0.84[CHB][hapmap] |
rs1546818 | 0.89[ASN][1000 genomes] |
rs1800438 | 0.82[ASN][1000 genomes] |
rs1807042 | 0.85[ASN][1000 genomes] |
rs1886905 | 0.80[CEU][hapmap] |
rs2009578 | 0.82[ASN][1000 genomes] |
rs2071053 | 0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2072647 | 0.88[ASN][1000 genomes] |
rs2075566 | 0.93[ASN][1000 genomes] |
rs2075569 | 0.82[ASN][1000 genomes] |
rs2236863 | 0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2236864 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2242576 | 0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2242577 | 0.93[ASN][1000 genomes] |
rs2297480 | 0.96[CEU][hapmap];0.95[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.97[TSI][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs2361536 | 0.88[ASN][1000 genomes] |
rs2361543 | 0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs3020781 | 0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs34906309 | 0.89[ASN][1000 genomes] |
rs3754485 | 0.82[ASN][1000 genomes] |
rs3762272 | 0.92[ASN][1000 genomes] |
rs3768566 | 0.81[ASN][1000 genomes] |
rs3814318 | 0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs3814319 | 0.89[AMR][1000 genomes];0.98[ASN][1000 genomes] |
rs4043 | 0.81[ASN][1000 genomes] |
rs4971072 | 0.83[ASN][1000 genomes] |
rs5005770 | 0.84[CEU][hapmap];0.84[CHB][hapmap];0.85[TSI][hapmap] |
rs56310840 | 0.81[ASN][1000 genomes] |
rs59062514 | 0.86[ASN][1000 genomes] |
rs6672284 | 0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs734073 | 0.89[ASN][1000 genomes] |
rs734074 | 0.88[ASN][1000 genomes] |
rs741756 | 0.86[ASN][1000 genomes] |
rs7520184 | 0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7524950 | 0.99[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs7534795 | 0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs7543234 | 0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7549276 | 0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs7554780 | 0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs762488 | 0.82[ASN][1000 genomes] |
rs8177968 | 0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs8847 | 0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs932972 | 0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9426886 | 0.83[JPT][hapmap] |
rs9628662 | 0.82[ASN][1000 genomes] |
rs9729564 | 0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv532579 | chr1:154548165-155262692 | Flanking Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS Weak transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 575 gene(s) | inside rSNPs | diseases |
2 | nsv831614 | chr1:155094978-155275031 | Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 434 gene(s) | inside rSNPs | diseases |
3 | esv2757756 | chr1:155094978-155314807 | Bivalent Enhancer Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 452 gene(s) | inside rSNPs | diseases |
4 | esv2758971 | chr1:155094978-155314807 | Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 452 gene(s) | inside rSNPs | diseases |
5 | nsv872457 | chr1:155135335-155310443 | Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 407 gene(s) | inside rSNPs | diseases |
6 | nsv831625 | chr1:155145634-155313409 | Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 407 gene(s) | inside rSNPs | diseases |
7 | nsv529709 | chr1:155154933-155757219 | Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 450 gene(s) | inside rSNPs | diseases |
8 | esv1832331 | chr1:155213136-155271366 | Strong transcription Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 49 gene(s) | inside rSNPs | diseases |
9 | esv1826485 | chr1:155214478-155264270 | Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 48 gene(s) | inside rSNPs | diseases |
10 | nsv831636 | chr1:155219223-155444864 | Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 67 gene(s) | inside rSNPs | diseases |
11 | esv33869 | chr1:155223283-155917961 | Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 187 gene(s) | inside rSNPs | diseases |
12 | esv17013 | chr1:155227059-155262674 | Flanking Active TSS Enhancers Genic enhancers Strong transcription Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
13 | esv1797617 | chr1:155228592-155264270 | Genic enhancers Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
14 | esv1829849 | chr1:155228592-155264270 | Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
15 | esv1826924 | chr1:155230444-155271566 | Flanking Active TSS Weak transcription Active TSS Enhancers Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 31 gene(s) | inside rSNPs | diseases |
16 | esv1830821 | chr1:155230610-155265661 | Strong transcription Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 31 gene(s) | inside rSNPs | diseases |
17 | esv1831955 | chr1:155230610-155265661 | Genic enhancers Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 31 gene(s) | inside rSNPs | diseases |
18 | esv1826761 | chr1:155230622-155262613 | Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 31 gene(s) | inside rSNPs | diseases |
19 | esv1826280 | chr1:155230622-155262851 | Strong transcription Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 31 gene(s) | inside rSNPs | diseases |
20 | esv1832100 | chr1:155230622-155269896 | Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 31 gene(s) | inside rSNPs | diseases |
21 | esv1827811 | chr1:155230644-155271366 | Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 31 gene(s) | inside rSNPs | diseases |
22 | esv1827924 | chr1:155230644-155271366 | Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 31 gene(s) | inside rSNPs | diseases |
23 | esv1831963 | chr1:155239116-155267459 | Flanking Active TSS Genic enhancers Weak transcription Enhancers Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 27 gene(s) | inside rSNPs | diseases |
24 | esv1830532 | chr1:155239128-155267471 | Flanking Active TSS Active TSS Enhancers Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 27 gene(s) | inside rSNPs | diseases |
25 | nsv872466 | chr1:155259025-155269991 | Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' | Chromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
SNP | Gene | Cis/trans | Tissue | Source |
---|---|---|---|---|
rs4620533 | SPRR2A | cis | cerebellum | SCAN |
rs4620533 | THBS3 | cis | Whole Blood | GTEx |
rs4620533 | PKLR | cis | Nerve Tibial | GTEx |
rs4620533 | GBA | cis | Esophagus Mucosa | GTEx |
rs4620533 | GBAP1 | cis | Thyroid | GTEx |
rs4620533 | LAMTOR2 | cis | lymphoblastoid | seeQTL |
rs4620533 | RP11-263K19.4 | cis | Whole Blood | GTEx |
rs4620533 | FDPS | Cis_1M | lymphoblastoid | RTeQTL |
rs4620533 | HCN3 | cis | multi-tissue | Pritchard |
rs4620533 | GBAP1 | cis | Artery Tibial | GTEx |
rs4620533 | YY1AP1 | cis | cerebellum | SCAN |
rs4620533 | FDPS | cis | parietal | SCAN |
rs4620533 | LCE1C | cis | parietal | SCAN |
rs4620533 | RIT1 | Cis_1M | lymphoblastoid | RTeQTL |
rs4620533 | THEM5 | cis | parietal | SCAN |
rs4620533 | ADAM15 | cis | multi-tissue | Pritchard |
rs4620533 | DCST1 | cis | parietal | SCAN |
rs4620533 | GBAP1 | cis | parietal | SCAN |
rs4620533 | FDPS | cis | lymphoblastoid | seeQTL |
rs4620533 | CRNN | cis | cerebellum | SCAN |
rs4620533 | SCNM1 | cis | parietal | SCAN |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:155248200-155262800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
2 | chr1:155248800-155264800 | Weak transcription | Pancreas | Pancrea |
3 | chr1:155249000-155262800 | Weak transcription | Colonic Mucosa | Colon |
4 | chr1:155249400-155263200 | Weak transcription | H1 Cell Line | embryonic stem cell |
5 | chr1:155249400-155264800 | Weak transcription | Brain Angular Gyrus | brain |
6 | chr1:155253000-155262800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
7 | chr1:155253800-155263000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
8 | chr1:155254600-155263200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
9 | chr1:155254600-155264400 | Weak transcription | Spleen | Spleen |
10 | chr1:155255200-155263200 | Weak transcription | Duodenum Mucosa | Duodenum |
11 | chr1:155255400-155263000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
12 | chr1:155257000-155262800 | Strong transcription | Fetal Intestine Small | intestine |
13 | chr1:155258200-155263000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
14 | chr1:155258400-155264600 | Weak transcription | Esophagus | oesophagus |
15 | chr1:155258600-155264400 | Weak transcription | Gastric | stomach |
16 | chr1:155258800-155262800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
17 | chr1:155258800-155263200 | Weak transcription | Fetal Intestine Large | intestine |
18 | chr1:155259000-155263000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
19 | chr1:155259000-155264000 | Strong transcription | Liver | Liver |
20 | chr1:155261200-155264800 | Strong transcription | K562 | blood |
21 | chr1:155262600-155262800 | Bivalent Enhancer | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
22 | chr1:155262600-155263200 | Bivalent/Poised TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
23 | chr1:155262600-155264400 | Strong transcription | HepG2 | liver |