Variant report

Variant rs4620533
Chromosome Location chr1:155262613-155262614
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155248200-155262800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:155248800-155264800 Weak transcription Pancreas Pancrea
3 chr1:155249000-155262800 Weak transcription Colonic Mucosa Colon
4 chr1:155249400-155263200 Weak transcription H1 Cell Line embryonic stem cell
5 chr1:155249400-155264800 Weak transcription Brain Angular Gyrus brain
6 chr1:155253000-155262800 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr1:155253800-155263000 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:155254600-155263200 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:155254600-155264400 Weak transcription Spleen Spleen
10 chr1:155255200-155263200 Weak transcription Duodenum Mucosa Duodenum
11 chr1:155255400-155263000 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr1:155257000-155262800 Strong transcription Fetal Intestine Small intestine
13 chr1:155258200-155263000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:155258400-155264600 Weak transcription Esophagus oesophagus
15 chr1:155258600-155264400 Weak transcription Gastric stomach
16 chr1:155258800-155262800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:155258800-155263200 Weak transcription Fetal Intestine Large intestine
18 chr1:155259000-155263000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr1:155259000-155264000 Strong transcription Liver Liver
20 chr1:155261200-155264800 Strong transcription K562 blood
21 chr1:155262600-155262800 Bivalent Enhancer Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:155262600-155263200 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:155262600-155264400 Strong transcription HepG2 liver

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