Variant report

Variant rs3814319
Chromosome Location chr1:155258752-155258753
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155248200-155260600 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:155248200-155261200 Weak transcription Lung lung
3 chr1:155248200-155262800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:155248400-155259200 Weak transcription HSMMtube muscle
5 chr1:155248400-155259600 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:155248600-155258800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:155248800-155259400 Weak transcription Stomach Smooth Muscle stomach
8 chr1:155248800-155262000 Weak transcription Fetal Lung lung
9 chr1:155248800-155264800 Weak transcription Pancreas Pancrea
10 chr1:155249000-155262800 Weak transcription Colonic Mucosa Colon
11 chr1:155249200-155259400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:155249200-155260800 Weak transcription NHEK skin
13 chr1:155249200-155261200 Weak transcription H9 Cell Line embryonic stem cell
14 chr1:155249400-155263200 Weak transcription H1 Cell Line embryonic stem cell
15 chr1:155249400-155264800 Weak transcription Brain Angular Gyrus brain
16 chr1:155249600-155259800 Weak transcription Brain Inferior Temporal Lobe brain
17 chr1:155249600-155260200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:155249600-155260800 Weak transcription Brain Hippocampus Middle brain
19 chr1:155249600-155261600 Weak transcription Brain Cingulate Gyrus brain
20 chr1:155249600-155262600 Weak transcription Fetal Brain Male brain
21 chr1:155251000-155260200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:155251600-155260200 Strong transcription Fetal Stomach stomach
23 chr1:155251800-155259000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr1:155251800-155260400 Strong transcription Brain Germinal Matrix brain
25 chr1:155252000-155259000 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr1:155252400-155261000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:155252600-155261000 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr1:155252600-155262600 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr1:155253000-155262800 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr1:155253200-155261200 Weak transcription K562 blood
31 chr1:155253800-155258800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:155253800-155263000 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr1:155254200-155259800 Weak transcription Fetal Kidney kidney
34 chr1:155254600-155260200 Weak transcription Dnd41 blood
35 chr1:155254600-155260400 Strong transcription Fetal Brain Female brain
36 chr1:155254600-155263200 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr1:155254600-155264400 Weak transcription Spleen Spleen
38 chr1:155254800-155259400 Weak transcription Brain Anterior Caudate brain
39 chr1:155254800-155259800 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr1:155255200-155263200 Weak transcription Duodenum Mucosa Duodenum
41 chr1:155255400-155263000 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr1:155255600-155261800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:155256400-155261600 Weak transcription Fetal Muscle Trunk muscle
44 chr1:155256800-155258800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr1:155257000-155262800 Strong transcription Fetal Intestine Small intestine
46 chr1:155257600-155258800 Strong transcription Placenta Amnion Placenta Amnion
47 chr1:155257600-155259000 Strong transcription Fetal Muscle Leg muscle
48 chr1:155257800-155262600 Weak transcription HepG2 liver
49 chr1:155258000-155258800 Strong transcription Fetal Intestine Large intestine
50 chr1:155258200-155258800 Strong transcription Ovary ovary

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