The 2.0 version of rSNPBase

Variant report

Variant rs2084119
Chromosome Location chr5:74086588-74086589
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:74064000-74112400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:74064200-74102000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr5:74064400-74086600 Weak transcription Fetal Heart heart
4 chr5:74064400-74134600 Weak transcription Fetal Brain Male brain
5 chr5:74064800-74101200 Strong transcription iPS-20b Cell Line embryonic stem cell
6 chr5:74066600-74112800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr5:74069000-74153000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr5:74069600-74102600 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr5:74069800-74097000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr5:74070000-74095000 Weak transcription Fetal Kidney kidney
11 chr5:74070000-74097000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr5:74070000-74111600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr5:74071400-74095200 Weak transcription Spleen Spleen
14 chr5:74072400-74095600 Weak transcription Left Ventricle heart
15 chr5:74074200-74102600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr5:74074800-74094600 Weak transcription HSMM muscle
17 chr5:74074800-74097200 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr5:74074800-74097400 Weak transcription Liver Liver
19 chr5:74074800-74102200 Weak transcription Primary B cells from peripheral blood blood
20 chr5:74074800-74143400 Weak transcription Primary B cells from cord blood blood
21 chr5:74076200-74086600 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr5:74076400-74095400 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr5:74077600-74086600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr5:74077800-74086600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr5:74079200-74091400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr5:74079400-74095000 Weak transcription HMEC breast
27 chr5:74081200-74101200 Strong transcription HUES64 Cell Line embryonic stem cell
28 chr5:74081200-74101200 Strong transcription iPS-18 Cell Line embryonic stem cell
29 chr5:74081400-74097800 Strong transcription H9 Cell Line embryonic stem cell
30 chr5:74081400-74101400 Strong transcription HUES6 Cell Line embryonic stem cell
31 chr5:74081600-74098000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr5:74081600-74098600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr5:74081800-74101200 Strong transcription HUES48 Cell Line embryonic stem cell
34 chr5:74082400-74097800 Strong transcription H1 Cell Line embryonic stem cell
35 chr5:74082600-74089000 Strong transcription Primary T cells from cord blood blood
36 chr5:74082800-74087000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr5:74082800-74087400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr5:74083000-74089800 Strong transcription ES-I3 Cell Line embryonic stem cell
39 chr5:74083200-74088200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr5:74083200-74098000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr5:74083600-74090000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr5:74084200-74095400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr5:74084600-74087200 Strong transcription Brain Inferior Temporal Lobe brain
44 chr5:74084600-74088400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr5:74084600-74089400 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr5:74084800-74088400 Strong transcription HepG2 liver
47 chr5:74084800-74088600 Strong transcription Primary T cells fromperipheralblood blood
48 chr5:74085800-74087200 Strong transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr5:74085800-74087400 Strong transcription Primary T helper naive cells fromperipheralblood blood
50 chr5:74085800-74089000 Strong transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015