The 2.0 version of rSNPBase

Variant report

Variant rs62366421
Chromosome Location chr5:74112290-74112291
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:74064000-74112400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:74064400-74134600 Weak transcription Fetal Brain Male brain
3 chr5:74066600-74112800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr5:74069000-74153000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr5:74074800-74143400 Weak transcription Primary B cells from cord blood blood
6 chr5:74087600-74130000 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr5:74095800-74146000 Weak transcription Primary hematopoietic stem cells blood
8 chr5:74096000-74112400 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr5:74096000-74113400 Weak transcription Brain Angular Gyrus brain
10 chr5:74096000-74131000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr5:74096000-74134200 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr5:74096000-74134200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr5:74096000-74137200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr5:74096000-74137200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr5:74096200-74134200 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr5:74096400-74129600 Weak transcription Primary T cells fromperipheralblood blood
17 chr5:74096400-74133800 Weak transcription Fetal Thymus thymus
18 chr5:74097400-74147400 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr5:74097800-74114000 Weak transcription H9 Cell Line embryonic stem cell
20 chr5:74098200-74129200 Weak transcription Primary T cells from cord blood blood
21 chr5:74101000-74124000 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr5:74101200-74131600 Weak transcription Dnd41 blood
23 chr5:74101200-74132200 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr5:74101200-74136400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr5:74108400-74134200 Weak transcription Thymus Thymus
26 chr5:74109600-74113400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr5:74109800-74112600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr5:74109800-74117000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr5:74109800-74129600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr5:74110800-74115200 Weak transcription HepG2 liver
31 chr5:74111400-74112400 Enhancers H1 Cell Line embryonic stem cell
32 chr5:74111400-74113200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
33 chr5:74111600-74113000 Enhancers Cortex derived primary cultured neurospheres brain
34 chr5:74111600-74113800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr5:74111800-74112600 Enhancers HMEC breast
36 chr5:74111800-74112800 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
37 chr5:74111800-74112800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
38 chr5:74111800-74112800 Enhancers NHEK skin
39 chr5:74111800-74113600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr5:74111800-74113800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
41 chr5:74111800-74116400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr5:74112000-74112800 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
43 chr5:74112000-74112800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr5:74112000-74112800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr5:74112000-74125400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr5:74112200-74112400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr5:74112200-74112600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
48 chr5:74112200-74112600 Flanking Active TSS HUES64 Cell Line embryonic stem cell
49 chr5:74112200-74112600 Weak transcription A549 lung
50 chr5:74112200-74112800 Enhancers Brain Anterior Caudate brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015