Variant report

Variant rs2187827
Chromosome Location chr6:36459466-36459467
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:36411600-36476400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:36430800-36488800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr6:36437200-36461400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr6:36437800-36468000 Strong transcription Fetal Muscle Leg muscle
5 chr6:36437800-36477600 Strong transcription Fetal Thymus thymus
6 chr6:36438000-36461000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:36442200-36460200 Strong transcription Fetal Muscle Trunk muscle
8 chr6:36442800-36461200 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr6:36444600-36459800 Strong transcription Breast Myoepithelial Primary Cells Breast
10 chr6:36445400-36461200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr6:36446000-36460000 Strong transcription Primary B cells from peripheral blood blood
12 chr6:36447200-36477600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr6:36447400-36477800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr6:36448200-36461200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr6:36449800-36461600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr6:36449800-36461600 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr6:36450000-36479800 Weak transcription Stomach Mucosa stomach
18 chr6:36450200-36462400 Weak transcription Esophagus oesophagus
19 chr6:36451400-36460200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr6:36451800-36460200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
21 chr6:36452200-36459800 Strong transcription Duodenum Mucosa Duodenum
22 chr6:36452600-36459600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr6:36452600-36459800 Strong transcription Primary hematopoietic stem cells short term culture blood
24 chr6:36452600-36459800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr6:36452600-36459800 Strong transcription Brain Germinal Matrix brain
26 chr6:36452800-36459800 Strong transcription Sigmoid Colon Sigmoid Colon
27 chr6:36452800-36460400 Strong transcription Thymus Thymus
28 chr6:36453000-36462200 Weak transcription Colonic Mucosa Colon
29 chr6:36453200-36459800 Strong transcription Brain Substantia Nigra brain
30 chr6:36453800-36462000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
31 chr6:36455000-36461200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr6:36455000-36462400 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr6:36455200-36459600 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr6:36455200-36461000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr6:36455200-36462600 Weak transcription Small Intestine intestine
36 chr6:36455200-36476400 Weak transcription Pancreas Pancrea
37 chr6:36455400-36461000 Weak transcription Lung lung
38 chr6:36455400-36461200 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr6:36455400-36462400 Weak transcription H9 Cell Line embryonic stem cell
40 chr6:36455600-36462000 Weak transcription NHEK skin
41 chr6:36455600-36462800 Weak transcription Brain Hippocampus Middle brain
42 chr6:36455800-36461200 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr6:36455800-36462400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr6:36455800-36462600 Weak transcription Spleen Spleen
45 chr6:36456000-36459800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr6:36456000-36461200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr6:36456000-36461200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
48 chr6:36456000-36461800 Weak transcription Fetal Brain Male brain
49 chr6:36456000-36462200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr6:36456000-36462400 Weak transcription H1 Cell Line embryonic stem cell

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