Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10228492	0.94[AFR][1000 genomes]
rs10257651	0.83[AFR][1000 genomes]
rs11974509	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs17168038	0.89[ASN][1000 genomes]
rs2108514	0.90[AFR][1000 genomes]
rs2108515	0.94[AFR][1000 genomes]
rs28831979	0.91[ASN][1000 genomes]
rs4483055	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs55776849	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55816754	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs56216249	0.93[AMR][1000 genomes]
rs57360595	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60170162	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62443666	0.87[ASN][1000 genomes]
rs62443668	0.88[ASN][1000 genomes]
rs62443937	1.00[EUR][1000 genomes]
rs6962605	1.00[EUR][1000 genomes]
rs6969982	0.93[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs6970467	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs7793052	0.95[AFR][1000 genomes]
rs7796825	0.95[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14311600-14318200	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr7:14316200-14318000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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