The 2.0 version of rSNPBase

Variant report

Variant rs2211288
Chromosome Location chr6:109705051-109705052
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:109700200-109705600 Active TSS Stomach Smooth Muscle stomach
2 chr6:109700400-109705200 Active TSS Right Ventricle heart
3 chr6:109700600-109705800 Active TSS Ovary ovary
4 chr6:109700600-109706000 Active TSS Colonic Mucosa Colon
5 chr6:109700600-109706200 Active TSS Pancreatic Islets Pancreatic Islet
6 chr6:109700800-109705800 Active TSS Psoas Muscle Psoas
7 chr6:109701200-109705200 Active TSS Fetal Muscle Trunk muscle
8 chr6:109701400-109705200 Active TSS H1 Cell Line embryonic stem cell
9 chr6:109701400-109705600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
10 chr6:109701600-109705200 Active TSS ES-I3 Cell Line embryonic stem cell
11 chr6:109701600-109705600 Active TSS Brain Inferior Temporal Lobe brain
12 chr6:109701600-109705800 Active TSS HSMMtube muscle
13 chr6:109701800-109705200 Active TSS HUES48 Cell Line embryonic stem cell
14 chr6:109701800-109705200 Active TSS Brain Anterior Caudate brain
15 chr6:109701800-109705600 Active TSS Skeletal Muscle Female skeletal muscle
16 chr6:109702000-109705200 Active TSS iPS-20b Cell Line embryonic stem cell
17 chr6:109702400-109705200 Active TSS Pancreas Pancrea
18 chr6:109703800-109705400 Active TSS Right Atrium heart
19 chr6:109703800-109707000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr6:109704200-109705400 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
21 chr6:109704400-109706400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
22 chr6:109704600-109705200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr6:109704600-109705200 Flanking Active TSS Primary B cells from peripheral blood blood
24 chr6:109704600-109705200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr6:109704600-109705200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
26 chr6:109704600-109705200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
27 chr6:109704600-109705200 Enhancers Primary T killer naive cells fromperipheralblood blood
28 chr6:109704600-109705200 Weak transcription Lung lung
29 chr6:109704600-109705200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
30 chr6:109704600-109705200 Flanking Active TSS Dnd41 blood
31 chr6:109704600-109705400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
32 chr6:109704600-109705600 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr6:109704600-109705800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr6:109704600-109705800 Weak transcription Gastric stomach
35 chr6:109704600-109705800 Weak transcription Small Intestine intestine
36 chr6:109704600-109706000 Flanking Active TSS Muscle Satellite Cultured Cells --
37 chr6:109704600-109706000 Flanking Active TSS Liver Liver
38 chr6:109704600-109706200 Flanking Active TSS Primary monocytes fromperipheralblood blood
39 chr6:109704600-109706200 Flanking Active TSS Duodenum Mucosa Duodenum
40 chr6:109704600-109706400 Flanking Active TSS Primary hematopoietic stem cells blood
41 chr6:109704600-109706400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr6:109704600-109706400 Flanking Active TSS Hela-S3 cervix
43 chr6:109704600-109706400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
44 chr6:109704600-109706600 Enhancers Brain Cingulate Gyrus brain
45 chr6:109704600-109706600 Weak transcription Placenta Amnion Placenta Amnion
46 chr6:109704600-109706800 Enhancers Primary mononuclear cells fromperipheralblood Blood
47 chr6:109704600-109710800 Weak transcription Aorta Aorta
48 chr6:109704800-109705200 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr6:109704800-109705200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
50 chr6:109704800-109705200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015