Variant report

Variant	rs2222397
Chromosome Location	chr11:33827528-33827529
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs12282096	0.94[CHB][hapmap]
rs12361553	0.94[CHB][hapmap];0.80[ASN][1000 genomes]
rs2056396	0.94[CHB][hapmap]
rs2177123	1.00[CHB][hapmap];0.86[JPT][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2421209	1.00[CHB][hapmap];0.86[JPT][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4756031	0.87[CHB][hapmap];0.82[ASN][1000 genomes]
rs6484674	0.96[EUR][1000 genomes]
rs7125621	0.94[CHB][hapmap]
rs73496328	0.82[EUR][1000 genomes]
rs7927218	0.94[CHB][hapmap]
rs939804	0.94[CHB][hapmap];0.82[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33824600-33830000	Weak transcription	Fetal Brain Male	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links