Variant report

Variant	rs2421209
Chromosome Location	chr11:33803617-33803618
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs12282096	0.94[CHB][hapmap];0.93[CHD][hapmap];0.83[ASN][1000 genomes]
rs12361553	0.94[CHB][hapmap];0.96[CHD][hapmap];0.86[ASN][1000 genomes]
rs1402956	0.86[AMR][1000 genomes]
rs1464484	0.83[ASN][1000 genomes]
rs1522088	0.86[AMR][1000 genomes]
rs16924726	0.85[GIH][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes]
rs2056396	0.94[CHB][hapmap]
rs2140066	0.83[ASN][1000 genomes]
rs2177123	1.00[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2222397	1.00[CHB][hapmap];0.86[JPT][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2686246	0.85[GIH][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes]
rs4756031	0.87[CHB][hapmap]
rs6484674	0.92[EUR][1000 genomes]
rs7125621	0.94[CHB][hapmap];0.96[CHD][hapmap];0.81[ASN][1000 genomes]
rs7927218	0.94[CHB][hapmap];0.83[ASN][1000 genomes]
rs831593	0.86[AMR][1000 genomes]
rs831601	0.86[AMR][1000 genomes]
rs831602	0.86[AMR][1000 genomes]
rs939804	0.94[CHB][hapmap];0.93[CHD][hapmap]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33802200-33818200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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