Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr11:33829550-33830393	HCT-116	colon:	n/a	chr11:33829962-33829972 chr11:33829958-33829974 chr11:33829959-33829980 chr11:33829960-33829969 chr11:33829960-33829973 chr11:33829957-33829975
2	CTCF	chr11:33829420-33829570	AoAF	blood vessel:	n/a	n/a
3	CTCF	chr11:33829440-33829590	GM06990	blood:	n/a	n/a
4	CTCF	chr11:33829500-33830423	A549	lung:	n/a	chr11:33829962-33829972 chr11:33829958-33829974 chr11:33829959-33829980 chr11:33829960-33829969 chr11:33829960-33829973 chr11:33829957-33829975

No.	Distal block	Cell Line	Cell type
1	chr11:33828509..33830233-chr11:34379250..34381956,2	MCF-7	breast:
2	chr11:33829510..33830030-chr11:34195544..34196521,2	K562	blood:
3	chr11:33827983..33829777-chr11:33833122..33835279,2	K562	blood:
4	chr11:33829510..33830420-chr11:33849451..33850247,2	K562	blood:
5	chr11:33829495..33830904-chr11:33850724..33851895,13	K562	blood:
6	chr11:33829494..33830013-chr11:34380233..34381003,2	K562	blood:
7	chr11:33824257..33826244-chr11:33828062..33830421,2	K562	blood:
8	chr11:33829491..33830362-chr11:33850833..33851690,3	MCF-7	breast:
9	chr11:33829487..33830424-chr11:33992296..33993010,3	K562	blood:
10	chr11:33829464..33830463-chr11:33850763..33851644,6	MCF-7	breast:
11	chr11:33827463..33830110-chr11:33848684..33852679,4	K562	blood:
12	chr11:33829424..33830030-chr11:34009603..34010204,2	K562	blood:

Variant related genes	Relation type
ENSG00000254619	TF binding region
ENSG00000166016	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11032400	0.81[EUR][1000 genomes]
rs12282096	0.94[CHB][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12361553	0.94[CHB][hapmap];0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1402957	0.85[ASN][1000 genomes]
rs1464484	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2056396	0.94[CHB][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2140066	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2177123	0.87[CHB][hapmap]
rs2222397	0.87[CHB][hapmap];0.82[ASN][1000 genomes]
rs2421209	0.87[CHB][hapmap]
rs4755340	0.81[EUR][1000 genomes]
rs4756025	0.82[EUR][1000 genomes]
rs6416077	0.81[EUR][1000 genomes]
rs6484676	0.81[EUR][1000 genomes]
rs6484677	0.81[EUR][1000 genomes]
rs6484678	0.81[EUR][1000 genomes]
rs7125621	0.94[CHB][hapmap];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7131427	0.81[EUR][1000 genomes]
rs7927218	0.94[CHB][hapmap];0.88[JPT][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7928022	0.81[EUR][1000 genomes]
rs939804	0.94[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33824600-33830000	Weak transcription	Fetal Brain Male	brain
2	chr11:33829000-33830200	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr11:33829200-33829800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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