Variant report

Variant	rs2223776
Chromosome Location	chr6:46145461-46145462
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1011370	0.80[CEU][hapmap]
rs1047153	0.88[CEU][hapmap]
rs1048077	0.92[CEU][hapmap];1.00[CHB][hapmap];0.80[CHD][hapmap];0.81[GIH][hapmap];0.80[TSI][hapmap];0.89[AMR][1000 genomes]
rs1076738	0.80[CEU][hapmap]
rs2143745	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2179759	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2206964	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4714902	0.83[CEU][hapmap]
rs5011271	0.96[CEU][hapmap];0.85[TSI][hapmap];0.94[EUR][1000 genomes]
rs7754915	0.92[CEU][hapmap];1.00[CHB][hapmap];0.81[GIH][hapmap];0.89[AMR][1000 genomes]
rs7766019	0.88[CEU][hapmap]
rs7772635	0.84[AMR][1000 genomes]
rs9369597	0.91[CEU][hapmap]
rs9395156	0.88[CEU][hapmap]
rs978681	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs995563	0.88[CEU][hapmap]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs2223776	ENPP5	cis	brain	seeQTL
rs2223776	ENPP4	cis	lymphoblastoid	seeQTL

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:46139200-46160800	Weak transcription	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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