Variant report
| Variant | rs2236020 |
|---|---|
| Chromosome Location | chr6:107191289-107191290 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:107179800-107197600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr6:107187400-107192000 | Weak transcription | Colonic Mucosa | Colon |
| 3 | chr6:107187800-107192400 | Weak transcription | A549 | lung |
| 4 | chr6:107188400-107191400 | Weak transcription | HMEC | breast |
| 5 | chr6:107188400-107191400 | Weak transcription | NHEK | skin |
| 6 | chr6:107188600-107192000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 7 | chr6:107188600-107193200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 8 | chr6:107189200-107191800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 9 | chr6:107189400-107193200 | Weak transcription | Liver | Liver |
| 10 | chr6:107190000-107191800 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 11 | chr6:107190200-107192200 | Weak transcription | Pancreas | Pancrea |
| 12 | chr6:107191000-107192000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 13 | chr6:107191000-107200800 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 14 | chr6:107191200-107191400 | Flanking Active TSS | Hela-S3 | cervix |
| 15 | chr6:107191200-107192600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 16 | chr6:107191200-107200400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
