Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1000677	0.93[ASN][1000 genomes]
rs10836113	0.84[ASN][1000 genomes]
rs11032379	0.90[ASN][1000 genomes]
rs11032382	0.90[ASN][1000 genomes]
rs11032396	0.88[ASN][1000 genomes]
rs1533800	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1533801	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17038	0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1879755	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1915891	0.94[ASN][1000 genomes]
rs2140067	0.90[ASN][1000 genomes]
rs2177121	0.90[ASN][1000 genomes]
rs2177122	0.90[ASN][1000 genomes]
rs4366460	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4447153	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4451703	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4451704	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4755341	0.90[ASN][1000 genomes]
rs4756033	0.84[ASN][1000 genomes]
rs6484672	0.90[ASN][1000 genomes]
rs7950864	0.86[ASN][1000 genomes]

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs2421211	CD59	cis	Esophagus Muscularis	GTEx
rs2421211	CD59	Cis_1M	lymphoblastoid	RTeQTL
rs2421211	CD59	cis	Artery Tibial	GTEx

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33802200-33818200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

Quick Search: