Variant report

Variant	rs2436154
Chromosome Location	chr11:83325634-83325635
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83320562..83322405-chr11:83324289..83326675,2	K562	blood:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs1228632	0.85[EUR][1000 genomes]
rs2248115	0.81[EUR][1000 genomes]
rs2436152	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2508720	0.81[EUR][1000 genomes]
rs4500510	0.82[EUR][1000 genomes]
rs478048	0.85[EUR][1000 genomes]
rs489752	0.81[EUR][1000 genomes]
rs491592	0.81[EUR][1000 genomes]
rs491633	0.81[EUR][1000 genomes]
rs500359	0.80[EUR][1000 genomes]
rs500578	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs506718	0.81[EUR][1000 genomes]
rs513020	0.81[EUR][1000 genomes]
rs535809	0.81[EUR][1000 genomes]
rs544159	0.81[EUR][1000 genomes]
rs544921	0.81[EUR][1000 genomes]
rs553935	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs558350	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs558426	0.80[EUR][1000 genomes]
rs582207	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs583944	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs585240	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs598934	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs603174	0.81[EUR][1000 genomes]
rs611766	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs633191	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs634368	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs643835	0.81[EUR][1000 genomes]
rs654442	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs656537	0.85[EUR][1000 genomes]
rs668625	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs671321	0.81[EUR][1000 genomes]
rs684729	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs694613	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83322600-83326000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr11:83323800-83328200	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr11:83324200-83341200	Weak transcription	Brain Anterior Caudate	brain
4	chr11:83324400-83340400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr11:83325200-83326000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr11:83325200-83326000	Weak transcription	Brain Angular Gyrus	brain
7	chr11:83325400-83326400	Enhancers	GM12878-XiMat	blood

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