Variant report

Variant	rs489752
Chromosome Location	chr11:83294978-83294979
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 80 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:80)

rs_ID	r²[population]
rs10898136	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1225904	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1225905	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1225906	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1225907	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1228630	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1897373	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2248115	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2436151	0.83[EUR][1000 genomes]
rs2436152	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2436154	0.81[EUR][1000 genomes]
rs2436157	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2436158	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2508717	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2508720	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2512689	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4500510	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4578410	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs473255	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs478946	0.81[EUR][1000 genomes]
rs488600	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs491592	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs491633	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs492607	0.81[EUR][1000 genomes]
rs494071	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs500359	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs500578	0.85[EUR][1000 genomes]
rs501139	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs505564	0.82[EUR][1000 genomes]
rs506718	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs513020	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs526787	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs531531	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs533209	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs534325	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs535809	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs536566	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs544159	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs544921	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs553935	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs556199	0.82[EUR][1000 genomes]
rs558350	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs558426	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs575952	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs579420	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs581178	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs582207	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs583944	0.90[EUR][1000 genomes]
rs585240	0.90[EUR][1000 genomes]
rs590014	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs598934	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs600570	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs601826	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs603174	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs605303	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs605825	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs611766	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs614398	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs622934	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs625091	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs630105	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs631277	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs633191	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs634368	0.81[EUR][1000 genomes]
rs638692	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs638746	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs641838	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs643835	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs654442	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs656537	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs661927	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs662966	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs663399	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs666845	0.82[EUR][1000 genomes]
rs667730	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs668625	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs671321	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs676038	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs683250	0.82[EUR][1000 genomes]
rs694613	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83293400-83296000	Enhancers	NHDF-Ad	bronchial
2	chr11:83293800-83295200	Enhancers	GM12878-XiMat	blood
3	chr11:83293800-83295800	Enhancers	Hela-S3	cervix
4	chr11:83294200-83295600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr11:83294200-83295600	Enhancers	NHEK	skin
6	chr11:83294200-83295800	Enhancers	Muscle Satellite Cultured Cells	--
7	chr11:83294200-83296000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr11:83294400-83295000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr11:83294400-83295600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr11:83294400-83295600	Enhancers	HSMMtube	muscle
11	chr11:83294400-83296000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr11:83294400-83296000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr11:83294400-83296000	Enhancers	HSMM	muscle
14	chr11:83294600-83295400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr11:83294600-83295800	Enhancers	Osteobl	bone
16	chr11:83294800-83295200	Enhancers	NH-A	brain

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