Variant report

Variant	rs505564
Chromosome Location	chr11:83277912-83277913
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 82 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:82)

rs_ID	r²[population]
rs10792688	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10792689	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10898135	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11233664	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1367984	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1367985	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1432052	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1432053	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1432054	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1432056	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1465670	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1465671	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1897373	0.84[EUR][1000 genomes]
rs2116483	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2116484	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2248115	0.82[EUR][1000 genomes]
rs2436158	0.84[EUR][1000 genomes]
rs2508717	0.81[EUR][1000 genomes]
rs2508720	0.83[EUR][1000 genomes]
rs4303248	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4399351	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4500510	0.80[EUR][1000 genomes]
rs4547114	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs472415	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs478946	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs488600	0.84[EUR][1000 genomes]
rs489752	0.82[EUR][1000 genomes]
rs491592	0.82[EUR][1000 genomes]
rs491633	0.82[EUR][1000 genomes]
rs492607	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs494071	0.83[EUR][1000 genomes]
rs495946	0.87[EUR][1000 genomes]
rs500059	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs500328	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs500359	0.83[EUR][1000 genomes]
rs500571	0.87[EUR][1000 genomes]
rs501473	0.86[EUR][1000 genomes]
rs505621	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs505998	0.87[EUR][1000 genomes]
rs506718	0.82[EUR][1000 genomes]
rs512556	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs513020	0.83[EUR][1000 genomes]
rs523494	0.87[EUR][1000 genomes]
rs526787	0.84[EUR][1000 genomes]
rs531531	0.80[EUR][1000 genomes]
rs533209	0.80[EUR][1000 genomes]
rs535809	0.83[EUR][1000 genomes]
rs536566	0.84[EUR][1000 genomes]
rs544159	0.83[EUR][1000 genomes]
rs544921	0.83[EUR][1000 genomes]
rs556199	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs558426	0.83[EUR][1000 genomes]
rs579420	0.81[EUR][1000 genomes]
rs590014	0.84[EUR][1000 genomes]
rs600570	0.80[EUR][1000 genomes]
rs601826	0.80[EUR][1000 genomes]
rs605303	0.84[EUR][1000 genomes]
rs605825	0.84[EUR][1000 genomes]
rs622934	0.82[EUR][1000 genomes]
rs638692	0.84[EUR][1000 genomes]
rs638746	0.84[EUR][1000 genomes]
rs641838	0.80[EUR][1000 genomes]
rs643835	0.82[EUR][1000 genomes]
rs646014	0.85[EUR][1000 genomes]
rs6592122	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6592123	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6592124	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs661927	0.84[EUR][1000 genomes]
rs662545	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs666845	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs667730	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs671321	0.83[EUR][1000 genomes]
rs67878169	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs683250	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs684857	0.88[EUR][1000 genomes]
rs7113026	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7113293	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7116058	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7928920	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7930252	0.81[EUR][1000 genomes]
rs7934399	0.84[EUR][1000 genomes]
rs9634001	0.81[EUR][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83266400-83278000	Weak transcription	Brain Anterior Caudate	brain
2	chr11:83266600-83278000	Weak transcription	Brain Hippocampus Middle	brain
3	chr11:83276200-83278600	Weak transcription	Brain Substantia Nigra	brain
4	chr11:83276600-83278600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr11:83277000-83278600	Enhancers	HSMMtube	muscle
6	chr11:83277200-83279000	Enhancers	Muscle Satellite Cultured Cells	--
7	chr11:83277200-83280600	Enhancers	Hela-S3	cervix
8	chr11:83277200-83280800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr11:83277400-83278000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr11:83277400-83278800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr11:83277400-83278800	Enhancers	NHDF-Ad	bronchial
12	chr11:83277400-83279000	Enhancers	HSMM	muscle
13	chr11:83277400-83279400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr11:83277600-83278600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr11:83277600-83278600	Enhancers	Osteobl	bone
16	chr11:83277600-83279200	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr11:83277600-83280200	Weak transcription	Brain Inferior Temporal Lobe	brain
18	chr11:83277800-83278600	Enhancers	NH-A	brain
19	chr11:83277800-83278600	Enhancers	NHLF	lung

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