Variant report

Variant	rs501473
Chromosome Location	chr11:83315117-83315118
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs1228632	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1432056	0.92[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2436152	0.80[EUR][1000 genomes]
rs4303248	0.84[EUR][1000 genomes]
rs472415	0.85[EUR][1000 genomes]
rs478048	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs478946	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs492607	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs495946	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs500059	0.89[EUR][1000 genomes]
rs500328	0.90[EUR][1000 genomes]
rs500571	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs505564	0.86[EUR][1000 genomes]
rs505621	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs505998	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs511740	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs512556	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs518143	0.94[AFR][1000 genomes];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs523494	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs556199	0.86[EUR][1000 genomes]
rs582207	0.80[EUR][1000 genomes]
rs611766	0.80[EUR][1000 genomes]
rs646014	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs654442	0.80[EUR][1000 genomes]
rs656537	0.80[EUR][1000 genomes]
rs662545	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs666845	0.86[EUR][1000 genomes]
rs668625	0.80[EUR][1000 genomes]
rs67878169	0.80[EUR][1000 genomes]
rs683250	0.86[EUR][1000 genomes]
rs684857	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs694613	0.80[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83312000-83315600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr11:83312000-83318800	Weak transcription	Brain Angular Gyrus	brain
3	chr11:83312000-83320400	Weak transcription	Brain Anterior Caudate	brain
4	chr11:83313800-83319600	Weak transcription	Brain Hippocampus Middle	brain
5	chr11:83314000-83315600	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr11:83314000-83320200	Weak transcription	Fetal Brain Female	brain
7	chr11:83314200-83318600	Weak transcription	Brain Substantia Nigra	brain
8	chr11:83315000-83316000	Enhancers	Fetal Brain Male	brain
9	chr11:83315000-83318600	Weak transcription	Brain Cingulate Gyrus	brain

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