Variant report

Variant	rs492607
Chromosome Location	chr11:83295311-83295312
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 66 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:66)

rs_ID	r²[population]
rs10792688	0.84[AMR][1000 genomes]
rs10792689	0.84[AMR][1000 genomes]
rs10898135	0.84[AMR][1000 genomes]
rs11233664	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1228632	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1367984	0.84[AMR][1000 genomes]
rs1367985	0.84[AMR][1000 genomes]
rs1432052	0.84[AMR][1000 genomes]
rs1432053	0.84[AMR][1000 genomes]
rs1432054	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1432056	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1432058	0.81[EUR][1000 genomes]
rs1465670	0.84[AMR][1000 genomes]
rs1465671	0.84[AMR][1000 genomes]
rs2116483	0.84[AMR][1000 genomes]
rs2116484	0.84[AMR][1000 genomes]
rs2195801	0.81[EUR][1000 genomes]
rs2248115	0.81[EUR][1000 genomes]
rs2508720	0.80[EUR][1000 genomes]
rs3815988	0.81[EUR][1000 genomes]
rs4303248	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4399351	0.83[AMR][1000 genomes]
rs4547114	0.84[AMR][1000 genomes]
rs472415	0.94[EUR][1000 genomes]
rs478048	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs478946	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs489752	0.81[EUR][1000 genomes]
rs491592	0.81[EUR][1000 genomes]
rs491633	0.81[EUR][1000 genomes]
rs495946	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs500059	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs500328	0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs500571	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs501473	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs505564	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs505621	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs505998	0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs506718	0.81[EUR][1000 genomes]
rs511740	0.81[EUR][1000 genomes]
rs512556	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs513020	0.80[EUR][1000 genomes]
rs518143	0.87[AFR][1000 genomes]
rs523494	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs535809	0.80[EUR][1000 genomes]
rs544159	0.80[EUR][1000 genomes]
rs544921	0.80[EUR][1000 genomes]
rs556199	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs603174	0.82[EUR][1000 genomes]
rs641838	0.82[EUR][1000 genomes]
rs643835	0.80[EUR][1000 genomes]
rs646014	0.92[AFR][1000 genomes];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6592122	0.84[AMR][1000 genomes]
rs6592123	0.84[AMR][1000 genomes]
rs6592124	0.84[AMR][1000 genomes]
rs662545	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs666845	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs671321	0.80[EUR][1000 genomes]
rs67878169	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs683250	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs684857	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7113026	0.84[AMR][1000 genomes]
rs7113293	0.84[AMR][1000 genomes]
rs7116058	0.85[AMR][1000 genomes]
rs7122339	0.81[EUR][1000 genomes]
rs7928920	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs7934399	0.85[AMR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83293400-83296000	Enhancers	NHDF-Ad	bronchial
2	chr11:83293800-83295800	Enhancers	Hela-S3	cervix
3	chr11:83294200-83295600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr11:83294200-83295600	Enhancers	NHEK	skin
5	chr11:83294200-83295800	Enhancers	Muscle Satellite Cultured Cells	--
6	chr11:83294200-83296000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr11:83294400-83295600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr11:83294400-83295600	Enhancers	HSMMtube	muscle
9	chr11:83294400-83296000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr11:83294400-83296000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr11:83294400-83296000	Enhancers	HSMM	muscle
12	chr11:83294600-83295400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr11:83294600-83295800	Enhancers	Osteobl	bone
14	chr11:83295000-83295400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr11:83295000-83295600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr11:83295200-83295600	Flanking Active TSS	NH-A	brain
17	chr11:83295200-83295800	Flanking Active TSS	GM12878-XiMat	blood

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