Variant report

Variant	rs472415
Chromosome Location	chr11:83267166-83267167
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 121 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:121)

rs_ID	r²[population]
rs1075718	0.83[CEU][hapmap];0.82[JPT][hapmap]
rs10792688	0.91[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10792689	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10898129	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10898135	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11233663	0.82[CHB][hapmap];0.84[JPT][hapmap]
rs11233664	0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1225905	0.81[AFR][1000 genomes]
rs1225906	0.81[AMR][1000 genomes]
rs1225907	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs1228630	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs1228632	0.91[CEU][hapmap];0.91[JPT][hapmap]
rs12294291	0.80[CEU][hapmap]
rs1347008	0.82[EUR][1000 genomes]
rs1367984	0.91[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1367985	0.91[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1367987	0.82[CHB][hapmap]
rs1432052	0.87[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1432053	0.91[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1432054	0.92[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1432056	0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1432058	0.87[CEU][hapmap];0.96[CHB][hapmap];0.95[JPT][hapmap];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1465670	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1465671	0.91[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1835764	0.88[ASN][1000 genomes]
rs1864774	0.80[CEU][hapmap]
rs2116483	0.91[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2116484	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2195801	0.87[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2436152	0.92[CEU][hapmap]
rs2436157	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs2508720	0.92[CEU][hapmap]
rs3793945	0.82[CHB][hapmap]
rs3793946	0.82[CHB][hapmap]
rs3815987	0.83[CEU][hapmap];0.82[JPT][hapmap];0.82[EUR][1000 genomes]
rs3815988	0.87[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4303248	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4399351	0.91[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4547114	0.92[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs473255	0.92[CEU][hapmap];0.84[CHB][hapmap];0.81[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs477046	0.87[CEU][hapmap];0.91[JPT][hapmap]
rs478048	0.91[CEU][hapmap];0.91[JPT][hapmap]
rs478946	0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs483020	0.92[CEU][hapmap];0.83[CHB][hapmap]
rs488600	0.92[CEU][hapmap]
rs492607	0.94[EUR][1000 genomes]
rs494071	0.92[CEU][hapmap]
rs495946	0.86[EUR][1000 genomes]
rs500059	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs500328	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs500359	0.92[CEU][hapmap]
rs500571	0.95[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.86[EUR][1000 genomes]
rs501139	0.83[CHB][hapmap];0.80[YRI][hapmap];0.81[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs501473	0.85[EUR][1000 genomes]
rs505564	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs505621	1.00[CEU][hapmap];0.83[CHB][hapmap];0.91[JPT][hapmap];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs505998	1.00[CEU][hapmap];0.87[CHB][hapmap];0.91[JPT][hapmap];0.86[EUR][1000 genomes]
rs506718	0.91[CEU][hapmap]
rs511740	0.87[CEU][hapmap];0.91[JPT][hapmap]
rs512556	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs513020	0.92[CEU][hapmap]
rs516344	0.87[CHB][hapmap]
rs516435	0.88[CHB][hapmap]
rs518143	0.88[CEU][hapmap];0.82[JPT][hapmap]
rs523494	0.86[EUR][1000 genomes]
rs531531	0.92[CEU][hapmap];0.83[CHB][hapmap]
rs533209	0.92[CEU][hapmap];0.83[CHB][hapmap]
rs535809	0.92[CEU][hapmap]
rs553935	0.88[CEU][hapmap]
rs556199	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs558426	0.92[CEU][hapmap]
rs574361	0.88[CHB][hapmap]
rs575952	0.92[CEU][hapmap];0.84[CHB][hapmap]
rs579420	0.88[CEU][hapmap]
rs581178	0.92[CEU][hapmap];0.84[CHB][hapmap];0.83[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs582207	0.91[CEU][hapmap]
rs583944	0.88[CEU][hapmap]
rs585240	0.84[CEU][hapmap]
rs590014	0.92[CEU][hapmap]
rs598934	0.88[CEU][hapmap]
rs600570	0.92[CEU][hapmap];0.83[CHB][hapmap]
rs601826	0.92[CEU][hapmap];0.83[CHB][hapmap]
rs603174	0.92[CEU][hapmap]
rs605303	0.92[CEU][hapmap]
rs605825	0.92[CEU][hapmap]
rs611766	0.88[CEU][hapmap]
rs630105	0.95[CEU][hapmap];0.82[CHB][hapmap]
rs631277	0.92[CEU][hapmap];0.84[CHB][hapmap]
rs633191	0.92[CEU][hapmap]
rs634368	0.86[CEU][hapmap]
rs641838	0.91[CEU][hapmap];0.80[EUR][1000 genomes]
rs645427	0.87[CHB][hapmap]
rs646014	0.84[EUR][1000 genomes]
rs6592120	0.82[JPT][hapmap]
rs6592122	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6592123	0.91[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6592124	0.87[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs661927	0.92[CEU][hapmap]
rs662545	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs662966	0.92[CEU][hapmap];0.83[CHB][hapmap];0.81[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs663399	0.92[CEU][hapmap];0.83[CHB][hapmap];0.80[YRI][hapmap];0.81[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs666845	1.00[CEU][hapmap];0.87[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs667730	0.92[CEU][hapmap]
rs671321	0.92[CEU][hapmap]
rs67878169	0.87[EUR][1000 genomes]
rs683250	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs684729	0.84[CEU][hapmap]
rs684857	1.00[CEU][hapmap];0.87[CHB][hapmap];0.91[JPT][hapmap];0.87[EUR][1000 genomes]
rs694613	0.88[CEU][hapmap]
rs7113026	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7113167	0.82[CHB][hapmap];0.82[JPT][hapmap]
rs7113293	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7116058	0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7122339	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7926588	0.87[CHB][hapmap]
rs7928920	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7930252	0.92[CEU][hapmap];0.96[CHB][hapmap];0.95[JPT][hapmap];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7934399	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs919667	0.83[CEU][hapmap];0.82[JPT][hapmap];0.82[EUR][1000 genomes]
rs958246	0.81[CEU][hapmap]
rs9634001	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83261800-83277200	Weak transcription	Hela-S3	cervix
2	chr11:83265600-83267200	Enhancers	Fetal Muscle Leg	muscle
3	chr11:83265800-83267200	Enhancers	Brain Cingulate Gyrus	brain
4	chr11:83266400-83278000	Weak transcription	Brain Anterior Caudate	brain
5	chr11:83266600-83275400	Weak transcription	Brain Substantia Nigra	brain
6	chr11:83266600-83278000	Weak transcription	Brain Hippocampus Middle	brain
7	chr11:83266800-83267200	Enhancers	Primary B cells from cord blood	blood
8	chr11:83267000-83270800	Enhancers	Primary B cells from peripheral blood	blood

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