Variant report

Variant	rs634368
Chromosome Location	chr11:83324911-83324912
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83320562..83322405-chr11:83324289..83326675,2	K562	blood:

Extended variants
information (count: 71 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:71)

rs_ID	r²[population]
rs1228632	0.95[CEU][hapmap];0.84[CHB][hapmap];0.85[EUR][1000 genomes]
rs2248115	0.81[EUR][1000 genomes]
rs2436152	0.86[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2436154	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2436158	0.85[CHB][hapmap];0.94[JPT][hapmap]
rs2508720	0.86[CEU][hapmap];0.85[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes]
rs4500510	0.82[EUR][1000 genomes]
rs472415	0.86[CEU][hapmap]
rs473255	0.86[CEU][hapmap];0.94[JPT][hapmap]
rs477046	0.90[CEU][hapmap];0.84[CHB][hapmap]
rs478048	0.95[CEU][hapmap];0.84[CHB][hapmap];0.85[EUR][1000 genomes]
rs483020	0.86[CEU][hapmap];0.94[JPT][hapmap]
rs488600	0.85[CEU][hapmap];0.94[JPT][hapmap]
rs489567	0.84[CHB][hapmap]
rs489752	0.81[EUR][1000 genomes]
rs491592	0.81[EUR][1000 genomes]
rs491633	0.81[EUR][1000 genomes]
rs494071	0.85[CEU][hapmap];0.94[JPT][hapmap]
rs500059	0.85[CEU][hapmap]
rs500359	0.86[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.80[EUR][1000 genomes]
rs500571	0.90[CEU][hapmap]
rs500578	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs501139	0.94[JPT][hapmap]
rs505621	0.85[CEU][hapmap]
rs505998	0.90[CEU][hapmap]
rs506718	0.85[CEU][hapmap];0.89[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes]
rs511740	0.90[CEU][hapmap]
rs513020	0.85[CEU][hapmap];0.84[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes]
rs518143	0.91[CEU][hapmap];0.80[CHB][hapmap]
rs531531	0.85[CEU][hapmap];0.94[JPT][hapmap]
rs532467	0.83[CHB][hapmap]
rs533209	0.85[CEU][hapmap];0.94[JPT][hapmap]
rs535809	0.85[CEU][hapmap];0.84[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes]
rs544159	0.81[EUR][1000 genomes]
rs544921	0.81[EUR][1000 genomes]
rs553935	0.91[CEU][hapmap];0.89[CHB][hapmap];0.94[JPT][hapmap];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs558350	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs558426	0.85[CEU][hapmap];0.94[JPT][hapmap];0.80[EUR][1000 genomes]
rs575952	0.86[CEU][hapmap];0.95[JPT][hapmap]
rs579420	0.82[CEU][hapmap];0.94[JPT][hapmap]
rs581178	0.85[CEU][hapmap];0.95[JPT][hapmap]
rs582207	0.94[CEU][hapmap];0.89[CHB][hapmap];0.94[JPT][hapmap];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs583944	0.91[CEU][hapmap];0.84[CHB][hapmap];0.94[JPT][hapmap];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs585240	0.86[CEU][hapmap];0.90[CHB][hapmap];0.94[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs590014	0.85[CEU][hapmap];0.94[JPT][hapmap]
rs598934	0.91[CEU][hapmap];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs600570	0.85[CEU][hapmap];0.94[JPT][hapmap]
rs601826	0.85[CEU][hapmap];0.94[JPT][hapmap]
rs603174	0.86[CEU][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes]
rs605303	0.86[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap]
rs605825	0.86[CEU][hapmap];0.85[CHB][hapmap];0.94[JPT][hapmap]
rs611766	0.91[CEU][hapmap];0.90[CHB][hapmap];0.94[JPT][hapmap];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs630105	0.84[CEU][hapmap];0.94[JPT][hapmap]
rs631277	0.86[CEU][hapmap];0.95[JPT][hapmap]
rs633191	0.86[CEU][hapmap];0.84[CHB][hapmap];0.94[JPT][hapmap];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs641838	0.85[CEU][hapmap];0.83[CHB][hapmap];1.00[JPT][hapmap]
rs643835	0.81[EUR][1000 genomes]
rs651491	0.89[CHB][hapmap]
rs654442	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs656537	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs661927	0.86[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap]
rs662966	0.85[CEU][hapmap];0.95[JPT][hapmap]
rs663399	0.85[CEU][hapmap];0.94[JPT][hapmap]
rs666845	0.85[CEU][hapmap]
rs667730	0.86[CEU][hapmap];0.85[CHB][hapmap];0.94[JPT][hapmap]
rs668625	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs671321	0.85[CEU][hapmap];0.84[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes]
rs684729	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs684857	0.85[CEU][hapmap]
rs688997	0.89[CHB][hapmap]
rs694613	0.91[CEU][hapmap];0.89[CHB][hapmap];0.94[JPT][hapmap];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83322200-83325200	Enhancers	Brain Cingulate Gyrus	brain
2	chr11:83322200-83325200	Enhancers	Brain Inferior Temporal Lobe	brain
3	chr11:83322600-83325000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr11:83322600-83325000	Enhancers	Brain Substantia Nigra	brain
5	chr11:83322600-83326000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr11:83322800-83325200	Enhancers	Brain Angular Gyrus	brain
7	chr11:83323800-83325200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr11:83323800-83328200	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr11:83324200-83341200	Weak transcription	Brain Anterior Caudate	brain
10	chr11:83324400-83340400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr11:83324800-83325400	Flanking Active TSS	GM12878-XiMat	blood

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