Variant report

Variant	rs532467
Chromosome Location	chr11:83275724-83275725
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 78 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:78)

rs_ID	r²[population]
rs10792690	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11233682	0.82[ASN][1000 genomes]
rs1465669	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2436152	0.85[CHB][hapmap]
rs2436156	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2436158	0.95[CHB][hapmap]
rs2508720	0.95[CHB][hapmap]
rs473255	0.81[CHB][hapmap]
rs483020	0.81[CHB][hapmap]
rs488600	0.90[CHB][hapmap]
rs489567	0.83[CEU][hapmap];0.80[CHB][hapmap];1.00[JPT][hapmap]
rs493431	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs494071	0.90[CHB][hapmap]
rs494303	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs500359	0.90[CHB][hapmap]
rs501139	0.80[CHB][hapmap]
rs506718	0.89[CHB][hapmap]
rs510978	0.87[JPT][hapmap]
rs513020	0.95[CHB][hapmap]
rs513710	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs515618	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs516344	0.96[CEU][hapmap]
rs516435	0.96[CEU][hapmap]
rs531531	0.81[CHB][hapmap]
rs533209	0.81[CHB][hapmap]
rs535755	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs535809	0.95[CHB][hapmap]
rs541133	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs543147	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs546557	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs548327	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];1.00[YRI][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs551108	0.92[CEU][hapmap];0.85[CHB][hapmap];0.87[JPT][hapmap];0.85[YRI][hapmap]
rs553935	0.89[CHB][hapmap]
rs558211	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs558426	0.90[CHB][hapmap]
rs560846	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs561890	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs571331	1.00[CEU][hapmap];0.90[CHB][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs574361	0.96[CEU][hapmap]
rs575952	0.81[CHB][hapmap]
rs579420	0.90[CHB][hapmap]
rs581178	0.81[CHB][hapmap]
rs582207	0.89[CHB][hapmap]
rs583944	0.84[CHB][hapmap]
rs585240	0.90[CHB][hapmap]
rs590014	0.90[CHB][hapmap]
rs591422	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.84[YRI][hapmap];0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs600570	0.81[CHB][hapmap]
rs601826	0.81[CHB][hapmap]
rs603174	0.90[CHB][hapmap]
rs605303	0.90[CHB][hapmap]
rs605825	0.95[CHB][hapmap]
rs611766	0.90[CHB][hapmap]
rs61902066	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs630105	0.81[CHB][hapmap]
rs631277	0.81[CHB][hapmap]
rs633191	0.95[CHB][hapmap]
rs634368	0.83[CHB][hapmap]
rs635823	0.95[CEU][hapmap];0.95[CHB][hapmap];0.93[JPT][hapmap];0.92[YRI][hapmap];0.82[AFR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs641838	0.94[CHB][hapmap]
rs645427	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs651491	0.85[CHB][hapmap];0.80[JPT][hapmap]
rs653546	0.95[CEU][hapmap];0.90[CHB][hapmap];0.86[JPT][hapmap];0.92[YRI][hapmap];0.85[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs661927	0.90[CHB][hapmap]
rs662966	0.81[CHB][hapmap]
rs663399	0.81[CHB][hapmap]
rs666675	0.84[AFR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs667730	0.95[CHB][hapmap]
rs671313	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs671321	0.95[CHB][hapmap]
rs676115	1.00[CEU][hapmap];0.85[CHB][hapmap];0.86[JPT][hapmap];0.83[EUR][1000 genomes]
rs684110	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs688997	0.81[CEU][hapmap];0.85[CHB][hapmap];0.88[JPT][hapmap]
rs694613	0.89[CHB][hapmap]
rs7116939	0.81[JPT][hapmap]
rs7926588	0.96[CEU][hapmap]
rs7928931	0.87[CEU][hapmap];1.00[YRI][hapmap]
rs7939707	0.82[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83261800-83277200	Weak transcription	Hela-S3	cervix
2	chr11:83266400-83278000	Weak transcription	Brain Anterior Caudate	brain
3	chr11:83266600-83278000	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:83275400-83276200	Enhancers	Brain Substantia Nigra	brain

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