Variant report

Variant	rs1465669
Chromosome Location	chr11:83257504-83257505
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83255700..83257941-chr11:83263394..83265882,2	K562	blood:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10792690	0.90[AMR][1000 genomes]
rs11233628	0.86[ASN][1000 genomes]
rs11233652	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1432057	0.81[ASN][1000 genomes]
rs2436156	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4316529	0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4494323	0.81[ASN][1000 genomes]
rs493431	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs494303	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs515618	0.86[AMR][1000 genomes]
rs532467	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs535755	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs541133	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs546557	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs548327	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs558211	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs560846	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs561890	0.83[AMR][1000 genomes]
rs571331	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57477484	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs591422	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs60824635	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs61902066	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs671313	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs684110	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7109050	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7116939	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7924348	0.80[ASN][1000 genomes]
rs7928931	0.85[EUR][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83251000-83257600	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr11:83251000-83257600	Enhancers	Brain Anterior Caudate	brain
3	chr11:83251000-83258200	Enhancers	Brain Hippocampus Middle	brain
4	chr11:83251200-83258200	Enhancers	Brain Inferior Temporal Lobe	brain
5	chr11:83251400-83257600	Enhancers	Brain Angular Gyrus	brain
6	chr11:83251600-83258200	Enhancers	Brain Substantia Nigra	brain
7	chr11:83252800-83258200	Enhancers	Fetal Intestine Large	intestine
8	chr11:83253600-83258000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr11:83255600-83261000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr11:83256000-83261400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr11:83256200-83259200	Weak transcription	Hela-S3	cervix
12	chr11:83256200-83261400	Weak transcription	NHEK	skin
13	chr11:83256400-83257600	Enhancers	Brain Germinal Matrix	brain
14	chr11:83256600-83257600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr11:83256800-83257600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
16	chr11:83256800-83257800	Enhancers	Fetal Brain Male	brain
17	chr11:83257000-83257600	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr11:83257200-83265600	Weak transcription	Fetal Stomach	stomach
19	chr11:83257400-83260000	Weak transcription	Brain Cingulate Gyrus	brain
20	chr11:83257400-83261600	Weak transcription	Fetal Lung	lung

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