Variant report

Variant	rs543147
Chromosome Location	chr11:83309400-83309401
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10792690	0.87[AFR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11233682	0.80[ASN][1000 genomes]
rs2436156	0.86[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs491632	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs493431	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs494303	0.94[AFR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs513710	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs515618	0.96[AFR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs532467	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs535755	0.93[AFR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs541133	0.81[EUR][1000 genomes]
rs546557	0.81[EUR][1000 genomes]
rs548327	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs551108	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs558211	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs560846	0.91[AFR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs561890	0.94[AFR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs571331	0.81[EUR][1000 genomes]
rs591422	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61902066	0.80[EUR][1000 genomes]
rs635823	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs653546	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs666675	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs671313	0.81[EUR][1000 genomes]
rs676115	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs684110	0.94[AFR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83297200-83311600	Weak transcription	Brain Angular Gyrus	brain
2	chr11:83309000-83314600	Enhancers	Fetal Brain Male	brain
3	chr11:83309200-83310000	Enhancers	Breast Myoepithelial Primary Cells	Breast

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