Variant report

Variant	rs676115
Chromosome Location	chr11:83315885-83315886
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 64 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:64)

rs_ID	r²[population]
rs10501540	0.84[CEU][hapmap]
rs10751093	0.85[CEU][hapmap]
rs10898125	0.80[CEU][hapmap]
rs10898134	0.84[CEU][hapmap]
rs11233641	0.83[CEU][hapmap]
rs11233654	0.84[CEU][hapmap]
rs11233657	0.84[CEU][hapmap]
rs11233663	0.82[CEU][hapmap]
rs11600016	0.80[CEU][hapmap]
rs11601048	0.84[CEU][hapmap]
rs11606666	0.82[CEU][hapmap]
rs12223102	0.84[CEU][hapmap]
rs12794550	0.84[CEU][hapmap]
rs1367978	0.85[CEU][hapmap]
rs1432049	0.81[CEU][hapmap]
rs1432057	0.84[CEU][hapmap]
rs2436153	0.83[ASN][1000 genomes]
rs2436155	0.84[ASN][1000 genomes]
rs2436156	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs3793945	0.81[CEU][hapmap]
rs4316529	0.84[CEU][hapmap]
rs4494323	0.84[CEU][hapmap]
rs485199	0.81[JPT][hapmap]
rs489567	0.84[CEU][hapmap];0.85[JPT][hapmap];0.83[ASN][1000 genomes]
rs491632	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs493431	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs494303	1.00[CEU][hapmap];0.90[CHB][hapmap];0.87[JPT][hapmap];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs506718	0.81[CHB][hapmap]
rs510978	0.87[JPT][hapmap]
rs513710	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs515618	1.00[CEU][hapmap];0.90[CHB][hapmap];0.85[JPT][hapmap];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs516344	0.96[CEU][hapmap]
rs516435	0.96[CEU][hapmap]
rs532467	1.00[CEU][hapmap];0.85[CHB][hapmap];0.86[JPT][hapmap];0.83[EUR][1000 genomes]
rs535755	0.88[EUR][1000 genomes]
rs541133	1.00[CEU][hapmap];0.81[JPT][hapmap];0.85[EUR][1000 genomes]
rs543147	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs546557	1.00[CEU][hapmap];0.86[JPT][hapmap];0.85[EUR][1000 genomes]
rs548327	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes]
rs551108	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs553935	0.81[CHB][hapmap]
rs558211	1.00[CEU][hapmap];0.90[CHB][hapmap];0.85[JPT][hapmap];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs560846	0.88[EUR][1000 genomes]
rs561890	1.00[CEU][hapmap];0.81[CHB][hapmap];0.84[JPT][hapmap];0.86[EUR][1000 genomes]
rs571331	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs574361	0.96[CEU][hapmap]
rs582207	0.81[CHB][hapmap]
rs585240	0.82[CHB][hapmap]
rs591422	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs611766	0.82[CHB][hapmap]
rs61902066	0.85[EUR][1000 genomes]
rs635823	0.96[CEU][hapmap];0.81[CHB][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs645427	0.96[CEU][hapmap]
rs651491	0.81[CEU][hapmap];0.93[JPT][hapmap]
rs653546	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs666675	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs671313	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs684110	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs688997	0.82[CEU][hapmap]
rs694613	0.81[CHB][hapmap]
rs7127319	0.81[CEU][hapmap]
rs7924348	0.84[CEU][hapmap]
rs7926588	0.96[CEU][hapmap]
rs7928931	0.92[CEU][hapmap]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83312000-83318800	Weak transcription	Brain Angular Gyrus	brain
2	chr11:83312000-83320400	Weak transcription	Brain Anterior Caudate	brain
3	chr11:83313800-83319600	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:83314000-83320200	Weak transcription	Fetal Brain Female	brain
5	chr11:83314200-83318600	Weak transcription	Brain Substantia Nigra	brain
6	chr11:83315000-83316000	Enhancers	Fetal Brain Male	brain
7	chr11:83315000-83318600	Weak transcription	Brain Cingulate Gyrus	brain
8	chr11:83315600-83317000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr11:83315600-83317000	Enhancers	Brain Inferior Temporal Lobe	brain

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