Variant report

Variant	rs2490996
Chromosome Location	chr9:96522775-96522776
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10992914	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs10992916	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs10992925	1.00[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs10992926	1.00[CHB][hapmap]
rs10992927	1.00[CHB][hapmap]
rs10992928	1.00[CHB][hapmap];1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs10992929	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs10992930	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs1987046	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2265563	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2265564	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2265565	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2265571	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2265799	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2265805	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2487010	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2487016	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2487017	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2487022	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2490999	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2491000	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3996258	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3996259	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4308795	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4636266	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62574261	0.86[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs62575578	1.00[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs62575579	1.00[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs62575608	0.88[ASN][1000 genomes]
rs62575609	1.00[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs62575610	1.00[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs62575611	1.00[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs7027806	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9409687	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9409695	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:96520200-96523000	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr9:96522000-96522800	Enhancers	iPS-20b Cell Line	embryonic stem cell

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