Variant report

Variant	rs2514816
Chromosome Location	chr8:95187149-95187150
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs12545326	1.00[ASN][1000 genomes]
rs1600765	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2157	0.87[EUR][1000 genomes]
rs2243518	0.92[EUR][1000 genomes]
rs2446865	0.99[ASN][1000 genomes]
rs2514809	0.84[ASN][1000 genomes]
rs2514810	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2514812	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2514813	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2514819	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2613234	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2613235	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2623153	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2623170	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28840369	0.98[ASN][1000 genomes]
rs3214050	0.82[ASN][1000 genomes]
rs72670357	0.82[ASN][1000 genomes]
rs7833351	0.86[ASN][1000 genomes]
rs957013	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:95170200-95190400	Strong transcription	Rectal Mucosa Donor 29	rectum
2	chr8:95177800-95188400	Weak transcription	Rectal Smooth Muscle	rectum
3	chr8:95177800-95190000	Strong transcription	Fetal Intestine Large	intestine
4	chr8:95179200-95190000	Strong transcription	Duodenum Mucosa	Duodenum
5	chr8:95184400-95190000	Strong transcription	Rectal Mucosa Donor 31	rectum
6	chr8:95185800-95188000	Weak transcription	Colonic Mucosa	Colon
7	chr8:95186400-95188200	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr8:95186800-95187600	Weak transcription	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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