Variant report

Variant	rs2514812
Chromosome Location	chr8:95184554-95184555
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:95170830..95174047-chr8:95182849..95185604,3	MCF-7	breast:
2	chr8:95168326..95171086-chr8:95181952..95185312,3	MCF-7	breast:

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12545326	0.96[ASN][1000 genomes]
rs1600765	0.95[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2157	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2243518	0.82[YRI][hapmap];0.87[EUR][1000 genomes]
rs2446865	0.95[ASN][1000 genomes]
rs2514809	0.95[CHB][hapmap];0.95[JPT][hapmap];0.85[YRI][hapmap];0.81[ASN][1000 genomes]
rs2514810	0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2514813	0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2514816	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2514819	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2613234	0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2613235	0.94[CHB][hapmap];0.95[JPT][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2623153	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2623170	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2879672	0.95[JPT][hapmap]
rs28840369	0.96[ASN][1000 genomes]
rs6471435	0.95[JPT][hapmap]
rs7833351	0.89[CHB][hapmap];0.95[JPT][hapmap];0.84[ASN][1000 genomes]
rs7842215	0.84[CHB][hapmap];0.95[JPT][hapmap]
rs957013	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:95140800-95187000	Weak transcription	Small Intestine	intestine
2	chr8:95170200-95190400	Strong transcription	Rectal Mucosa Donor 29	rectum
3	chr8:95173600-95185000	Weak transcription	Colonic Mucosa	Colon
4	chr8:95177800-95188400	Weak transcription	Rectal Smooth Muscle	rectum
5	chr8:95177800-95190000	Strong transcription	Fetal Intestine Large	intestine
6	chr8:95179200-95190000	Strong transcription	Duodenum Mucosa	Duodenum
7	chr8:95182000-95185000	Weak transcription	Fetal Intestine Small	intestine
8	chr8:95182000-95185200	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr8:95184000-95184600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr8:95184200-95184600	Enhancers	Cortex derived primary cultured neurospheres	brain
11	chr8:95184400-95190000	Strong transcription	Rectal Mucosa Donor 31	rectum

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