The 2.0 version of rSNPBase

Variant report

Variant rs2588820
Chromosome Location chr14:68628528-68628529
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:68613000-68631200 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr14:68621200-68630000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr14:68621400-68631000 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr14:68623000-68630600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr14:68623000-68631000 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr14:68624000-68630400 Weak transcription Ovary ovary
7 chr14:68625000-68629600 Weak transcription Fetal Intestine Small intestine
8 chr14:68625000-68631200 Weak transcription Fetal Muscle Leg muscle
9 chr14:68625000-68635600 Weak transcription HSMM muscle
10 chr14:68625200-68631200 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr14:68625200-68631200 Weak transcription Stomach Smooth Muscle stomach
12 chr14:68625200-68635000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr14:68625200-68636800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr14:68625400-68629600 Weak transcription Fetal Intestine Large intestine
15 chr14:68625600-68630800 Weak transcription HepG2 liver
16 chr14:68625600-68631200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr14:68625800-68631200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr14:68626800-68629000 Enhancers HUES48 Cell Line embryonic stem cell
19 chr14:68626800-68629600 Weak transcription Fetal Kidney kidney
20 chr14:68627000-68628600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr14:68627200-68630000 Weak transcription Fetal Stomach stomach
22 chr14:68627200-68631200 Weak transcription Psoas Muscle Psoas
23 chr14:68627400-68629600 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr14:68627800-68629600 Weak transcription Rectal Smooth Muscle rectum
25 chr14:68627800-68631200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr14:68628000-68628600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr14:68628000-68628800 Enhancers Rectal Mucosa Donor 31 rectum
28 chr14:68628000-68630000 Weak transcription Stomach Mucosa stomach
29 chr14:68628200-68628600 Active TSS Liver Liver
30 chr14:68628200-68629000 Enhancers HUES64 Cell Line embryonic stem cell
31 chr14:68628200-68629600 Weak transcription Colon Smooth Muscle Colon
32 chr14:68628200-68629800 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr14:68628200-68630000 Weak transcription Fetal Lung lung
34 chr14:68628200-68630000 Weak transcription Small Intestine intestine
35 chr14:68628200-68631200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr14:68628400-68628800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr14:68628400-68632000 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015