Variant report

Variant	rs2590827
Chromosome Location	chr4:54589337-54589338
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1551880	0.93[ASN][1000 genomes]
rs1871028	0.95[ASN][1000 genomes]
rs1993838	0.97[ASN][1000 genomes]
rs2590775	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2590786	0.80[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2590829	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2616390	0.95[ASN][1000 genomes]
rs2616398	0.80[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2616405	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2616411	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2616412	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2668537	0.93[ASN][1000 genomes]
rs2668539	0.95[ASN][1000 genomes]
rs2668540	0.80[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs3915415	0.82[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:54584000-54600000	Weak transcription	Osteobl	bone

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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