Variant report

Variant rs2668539
Chromosome Location chr4:54572883-54572884
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:54569200-54573200 Enhancers Primary B cells from peripheral blood blood
2 chr4:54569400-54573200 Enhancers Primary B cells from cord blood blood
3 chr4:54569400-54577200 Weak transcription Aorta Aorta
4 chr4:54569600-54573200 Weak transcription Colonic Mucosa Colon
5 chr4:54569600-54580200 Weak transcription HSMM muscle
6 chr4:54569600-54583200 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr4:54569800-54577800 Weak transcription Right Atrium heart
8 chr4:54569800-54578600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr4:54570200-54577800 Weak transcription Muscle Satellite Cultured Cells --
10 chr4:54571000-54573200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
11 chr4:54571200-54573200 Enhancers NHDF-Ad bronchial
12 chr4:54571400-54573000 Enhancers Rectal Mucosa Donor 31 rectum
13 chr4:54571400-54573000 Enhancers Skeletal Muscle Male skeletal muscle
14 chr4:54571400-54573000 Enhancers Osteobl bone
15 chr4:54571400-54573200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
16 chr4:54571400-54573200 Enhancers NHLF lung
17 chr4:54571400-54576000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr4:54571600-54573200 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr4:54571600-54573800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
20 chr4:54572000-54573000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr4:54572000-54573000 Bivalent Enhancer Fetal Lung lung
22 chr4:54572000-54573000 Enhancers Rectal Mucosa Donor 29 rectum
23 chr4:54572200-54573200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr4:54572200-54573200 Bivalent Enhancer Fetal Muscle Leg muscle
25 chr4:54572200-54577200 Weak transcription Lung lung
26 chr4:54572400-54573000 Enhancers Fetal Heart heart
27 chr4:54572400-54573200 Enhancers Liver Liver
28 chr4:54572400-54573200 Enhancers Psoas Muscle Psoas
29 chr4:54572600-54573000 Enhancers HUES6 Cell Line embryonic stem cell
30 chr4:54572600-54573000 Enhancers Fetal Kidney kidney
31 chr4:54572600-54573000 Enhancers Fetal Stomach stomach
32 chr4:54572600-54573000 Enhancers Skeletal Muscle Female skeletal muscle
33 chr4:54572600-54573200 Enhancers H1 Cell Line embryonic stem cell
34 chr4:54572600-54573400 Enhancers GM12878-XiMat blood
35 chr4:54572600-54577400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr4:54572800-54573000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr4:54572800-54573000 Enhancers Pancreatic Islets Pancreatic Islet
38 chr4:54572800-54573200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
39 chr4:54572800-54573200 Enhancers Gastric stomach
40 chr4:54572800-54573200 Enhancers Ovary ovary
41 chr4:54572800-54573200 Enhancers Pancreas Pancrea
42 chr4:54572800-54573200 Enhancers Spleen Spleen
43 chr4:54572800-54578600 Weak transcription Adipose Nuclei Adipose

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