The 2.0 version of rSNPBase

Variant report

Variant rs2634029
Chromosome Location chr1:92318614-92318615
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92296400-92335800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr1:92300800-92329600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:92312000-92329800 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr1:92312000-92337200 Weak transcription Fetal Intestine Small intestine
5 chr1:92312600-92319600 Weak transcription Placenta Placenta
6 chr1:92312600-92322200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr1:92312800-92325600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr1:92313800-92328200 Weak transcription Esophagus oesophagus
9 chr1:92315000-92329800 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:92315200-92330200 Weak transcription Spleen Spleen
11 chr1:92316800-92325000 Weak transcription Primary T cells fromperipheralblood blood
12 chr1:92317000-92319200 Weak transcription Ovary ovary
13 chr1:92317000-92330000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr1:92317200-92329000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:92317400-92318800 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:92317400-92319600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr1:92317400-92320000 Strong transcription Fetal Stomach stomach
18 chr1:92317400-92329200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:92317400-92329800 Weak transcription Fetal Kidney kidney
20 chr1:92317400-92337200 Weak transcription K562 blood
21 chr1:92317400-92338000 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr1:92317400-92344400 Weak transcription Fetal Intestine Large intestine
23 chr1:92317600-92320400 Weak transcription Rectal Smooth Muscle rectum
24 chr1:92317600-92320600 Weak transcription Colon Smooth Muscle Colon
25 chr1:92317600-92324600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:92317600-92325600 Weak transcription Liver Liver
27 chr1:92317600-92329200 Weak transcription Osteobl bone
28 chr1:92317600-92329600 Weak transcription Muscle Satellite Cultured Cells --
29 chr1:92317600-92335800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr1:92317800-92319600 Weak transcription Right Ventricle heart
31 chr1:92317800-92320600 Weak transcription Fetal Muscle Leg muscle
32 chr1:92317800-92326000 Weak transcription Fetal Muscle Trunk muscle
33 chr1:92318000-92319200 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr1:92318000-92319600 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr1:92318000-92319600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:92318000-92320000 Weak transcription Stomach Smooth Muscle stomach
37 chr1:92318000-92320200 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr1:92318000-92320600 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr1:92318000-92320800 Weak transcription Adipose Nuclei Adipose
40 chr1:92318000-92320800 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr1:92318000-92320800 Weak transcription Gastric stomach
42 chr1:92318000-92321800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr1:92318000-92326600 Weak transcription NHLF lung
44 chr1:92318000-92328800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr1:92318000-92328800 Weak transcription Fetal Lung lung
46 chr1:92318000-92336800 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr1:92318000-92337000 Weak transcription Small Intestine intestine
48 chr1:92318200-92319800 Weak transcription Lung lung
49 chr1:92318200-92319800 Weak transcription Pancreas Pancrea
50 chr1:92318200-92319800 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015