Variant report

Variant rs2799524
Chromosome Location chr1:92317312-92317313
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92296400-92335800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr1:92300800-92329600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:92308200-92317400 Weak transcription Lung lung
4 chr1:92312000-92329800 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr1:92312000-92337200 Weak transcription Fetal Intestine Small intestine
6 chr1:92312600-92319600 Weak transcription Placenta Placenta
7 chr1:92312600-92322200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:92312800-92325600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:92313800-92328200 Weak transcription Esophagus oesophagus
10 chr1:92315000-92329800 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr1:92315200-92330200 Weak transcription Spleen Spleen
12 chr1:92315800-92318000 Enhancers Primary Natural Killer cells fromperipheralblood blood
13 chr1:92316000-92317600 Enhancers Aorta Aorta
14 chr1:92316000-92318200 Enhancers Left Ventricle heart
15 chr1:92316000-92318200 Enhancers Psoas Muscle Psoas
16 chr1:92316200-92317600 Enhancers Stomach Mucosa stomach
17 chr1:92316400-92317400 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:92316400-92317400 Enhancers Fetal Kidney kidney
19 chr1:92316400-92317400 Flanking Active TSS Fetal Lung lung
20 chr1:92316400-92317600 Flanking Active TSS Stomach Smooth Muscle stomach
21 chr1:92316400-92317600 Flanking Active TSS A549 lung
22 chr1:92316400-92317600 Flanking Active TSS NHLF lung
23 chr1:92316400-92317800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:92316400-92318000 Enhancers Brain Inferior Temporal Lobe brain
25 chr1:92316400-92318000 Enhancers Sigmoid Colon Sigmoid Colon
26 chr1:92316600-92317400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:92316600-92317400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:92316600-92317400 Flanking Active TSS Muscle Satellite Cultured Cells --
29 chr1:92316600-92317400 Flanking Active TSS Fetal Heart heart
30 chr1:92316600-92317400 Flanking Active TSS Hela-S3 cervix
31 chr1:92316600-92317400 Enhancers HSMM muscle
32 chr1:92316600-92317400 Enhancers K562 blood
33 chr1:92316600-92317400 Transcr. at gene 5' and 3' NHDF-Ad bronchial
34 chr1:92316600-92317400 Flanking Active TSS Osteobl bone
35 chr1:92316800-92317400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr1:92316800-92317400 Flanking Active TSS Duodenum Mucosa Duodenum
37 chr1:92316800-92317400 Active TSS Pancreatic Islets Pancreatic Islet
38 chr1:92316800-92317600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
39 chr1:92316800-92317600 Enhancers Liver Liver
40 chr1:92316800-92318200 Enhancers Pancreas Pancrea
41 chr1:92316800-92325000 Weak transcription Primary T cells fromperipheralblood blood
42 chr1:92317000-92317400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:92317000-92317400 Enhancers Brain Anterior Caudate brain
44 chr1:92317000-92317400 Enhancers Brain Cingulate Gyrus brain
45 chr1:92317000-92317400 Enhancers Fetal Intestine Large intestine
46 chr1:92317000-92317600 Enhancers Colon Smooth Muscle Colon
47 chr1:92317000-92317600 Enhancers Fetal Adrenal Gland Adrenal Gland
48 chr1:92317000-92317800 Enhancers Fetal Muscle Trunk muscle
49 chr1:92317000-92317800 Enhancers Fetal Muscle Leg muscle
50 chr1:92317000-92317800 Enhancers Right Ventricle heart

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