Variant report

Variant rs2799522
Chromosome Location chr1:92306976-92306977
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92294800-92311600 Weak transcription Gastric stomach
2 chr1:92296400-92335800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:92296800-92307400 Weak transcription Lung lung
4 chr1:92296800-92307800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:92296800-92309400 Weak transcription Left Ventricle heart
6 chr1:92296800-92311400 Weak transcription Stomach Mucosa stomach
7 chr1:92297000-92308000 Weak transcription Primary T cells fromperipheralblood blood
8 chr1:92297000-92310400 Weak transcription Pancreas Pancrea
9 chr1:92297000-92311000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr1:92297200-92308200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:92297200-92311800 Weak transcription Fetal Intestine Large intestine
12 chr1:92297200-92313600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr1:92297800-92310400 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:92298200-92314600 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr1:92300000-92310200 Weak transcription Fetal Lung lung
16 chr1:92300800-92309600 Weak transcription Fetal Muscle Trunk muscle
17 chr1:92300800-92329600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:92301000-92307000 Weak transcription Ovary ovary
19 chr1:92301000-92309400 Weak transcription Fetal Stomach stomach
20 chr1:92301000-92311000 Weak transcription Rectal Smooth Muscle rectum
21 chr1:92301200-92307800 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr1:92301200-92309200 Weak transcription Fetal Muscle Leg muscle
23 chr1:92302400-92309200 Enhancers HepG2 liver
24 chr1:92302600-92309200 Weak transcription Right Ventricle heart
25 chr1:92302600-92310000 Weak transcription Fetal Heart heart
26 chr1:92302600-92310800 Weak transcription Stomach Smooth Muscle stomach
27 chr1:92303800-92307800 Weak transcription A549 lung
28 chr1:92304800-92311600 Weak transcription Right Atrium heart
29 chr1:92305000-92309600 Weak transcription Esophagus oesophagus
30 chr1:92305800-92310400 Weak transcription Placenta Placenta
31 chr1:92306000-92314800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
32 chr1:92306200-92307000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:92306400-92309200 Enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr1:92306600-92307000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:92306600-92307000 Enhancers Fetal Adrenal Gland Adrenal Gland
36 chr1:92306600-92307000 Genic enhancers NHDF-Ad bronchial
37 chr1:92306600-92307000 Enhancers NHLF lung
38 chr1:92306600-92307200 Enhancers Muscle Satellite Cultured Cells --
39 chr1:92306600-92307200 Enhancers Hela-S3 cervix
40 chr1:92306600-92308200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:92306600-92308200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:92306600-92308400 Enhancers Rectal Mucosa Donor 31 rectum
43 chr1:92306600-92308600 Enhancers Colon Smooth Muscle Colon
44 chr1:92306800-92307000 Genic enhancers Breast Myoepithelial Primary Cells Breast
45 chr1:92306800-92307000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr1:92306800-92307000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:92306800-92307000 Enhancers Adipose Nuclei Adipose
48 chr1:92306800-92307000 Enhancers Skeletal Muscle Female skeletal muscle
49 chr1:92306800-92307000 Enhancers K562 blood
50 chr1:92306800-92307000 Enhancers NHEK skin

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