Variant report

Variant rs2799547
Chromosome Location chr1:92308567-92308568
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92294800-92311600 Weak transcription Gastric stomach
2 chr1:92296400-92335800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:92296800-92309400 Weak transcription Left Ventricle heart
4 chr1:92296800-92311400 Weak transcription Stomach Mucosa stomach
5 chr1:92297000-92310400 Weak transcription Pancreas Pancrea
6 chr1:92297000-92311000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:92297200-92311800 Weak transcription Fetal Intestine Large intestine
8 chr1:92297200-92313600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr1:92297800-92310400 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr1:92298200-92314600 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr1:92300000-92310200 Weak transcription Fetal Lung lung
12 chr1:92300800-92309600 Weak transcription Fetal Muscle Trunk muscle
13 chr1:92300800-92329600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:92301000-92309400 Weak transcription Fetal Stomach stomach
15 chr1:92301000-92311000 Weak transcription Rectal Smooth Muscle rectum
16 chr1:92301200-92309200 Weak transcription Fetal Muscle Leg muscle
17 chr1:92302400-92309200 Enhancers HepG2 liver
18 chr1:92302600-92309200 Weak transcription Right Ventricle heart
19 chr1:92302600-92310000 Weak transcription Fetal Heart heart
20 chr1:92302600-92310800 Weak transcription Stomach Smooth Muscle stomach
21 chr1:92304800-92311600 Weak transcription Right Atrium heart
22 chr1:92305000-92309600 Weak transcription Esophagus oesophagus
23 chr1:92305800-92310400 Weak transcription Placenta Placenta
24 chr1:92306000-92314800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr1:92306400-92309200 Enhancers Primary Natural Killer cells fromperipheralblood blood
26 chr1:92306600-92308600 Enhancers Colon Smooth Muscle Colon
27 chr1:92306800-92309200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:92307000-92308600 Enhancers Ovary ovary
29 chr1:92307000-92309000 Weak transcription NHEK skin
30 chr1:92307000-92309200 Enhancers NHDF-Ad bronchial
31 chr1:92307000-92310200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:92307000-92310200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:92307000-92311000 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr1:92307000-92311200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr1:92307200-92309600 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:92307200-92310000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:92307200-92310000 Weak transcription Osteobl bone
38 chr1:92307800-92309000 Enhancers Sigmoid Colon Sigmoid Colon
39 chr1:92308000-92309000 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr1:92308000-92309600 Enhancers Primary T cells fromperipheralblood blood
41 chr1:92308000-92313600 Enhancers Fetal Adrenal Gland Adrenal Gland
42 chr1:92308200-92308600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:92308200-92308600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr1:92308200-92308800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:92308200-92309200 Weak transcription NHLF lung
46 chr1:92308200-92309600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:92308200-92310400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr1:92308200-92310400 Weak transcription Duodenum Mucosa Duodenum
49 chr1:92308200-92311200 Weak transcription K562 blood
50 chr1:92308200-92311400 Weak transcription Rectal Mucosa Donor 29 rectum

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